Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1495 ATGCAAGATATGAAGAAGCAGCAGAAGCAGAAACAGAAACAGCTGGTCAATGAAGAATCTAAGAAGAAGGAGCGTCACATTGTGACGTGGACTCAAGAGGAGGATGATATACTGAGAGAGCAGATTGGTATCCATGGAACTGAAAATTGGGCAATTATTGCTTCTAAATTCAAGGACAAAACGACAAGACAGTGCAGAAGAAGATGGTACACTTACTTGAACTCTGATTTCAAGAAAGGAGGATGGTCACCAGAGGAAGACATGCTCTTATGTGAGGCACAAAAAATATTTGGTAACAGGTGGACAGAAATAGCAAAGGTGGTTTCAGGCAGAACGGATAATGCTGTTAAAAACCGTTTCTCCACATTGTGCAAAAAGAGAGCAAAATATGAAGCCTTAGCAAAAGAAAACAACACTGCATACATCAATTCAAATAACAAAAGGATTTTTCTCCATCAGAACTGTCATACAGATGCAGCATCAGAATCTGCAGTAGCTCTTAAGAAGATGAGGAGGTCCCATATCCCTGATTCTGCAGAAAAGATCAACTTCGGAGACAGATCACATAAACAAAATGGAATTCCAATAAATCAGCAGCCAAGAGCACCATTTGCAGTTTTAGCTCAAAACTCTCATAATGTCAACATGCCAGACCAGCATCATGTCTGCACTTTGAAGTTTAGTGGTTATGCTCAAAACAACAAGATTCAAGGAACATTCCTTAAAAAGGATGATCCAAAGATAAGTGCATTGATGCAACAAGCAGAGTTACTAAGTTCGCTAGCTCTAAAAGTTGATGCAGAGAACATGGACCAAAGTCTTGAAAATGCGTGGAAGGTTCTTCAAGAGTTTCTGAACAGAACCAAAGAATCAGATATTCCCAGATATAAGATTCCAGATTTACAGCTCGTAGATCTTAAAGATTTGTTGGAGGACTTAAAGAGCAGTAGTGAGGAAATCCAGCCATGCTGGAGGCAAATGGAACTATATGAAGACTCTCCTGGAAGTTCTGAATACAGTACAGGATCAACTCTCCTTCCTCATGCAGCTGGTGAGAATTTGGAACACTCACTGCATCAGGATATTGGAACTGAACTAAAGTGTATACAAATTGGAGATCAAAAAGGATTTAGGGGATGTGACCAAGGTGGTCTTTCTAGTGCAACTCTGGGTCAAGATTTATTCCCATGTTGTGAGGAACAGATAAACAATGATGGCATTGTTTCTATCTTGTCAAGTACGGAGGAGTTCAGTTCACCTCTCCAAGTTACCCCTCTGTTCAGATCCTTAGCTGCTGGAATTCCTAGCCCTCAATTTTCAGAAAGTGAAAGGAACTTCCTTATGAAAACACTCGGAATGGAGTCTCCATCCCTCAACCCAAGTACCAACCCCTCGCAACCGCCACTCTGCAAAAGAGCCCTTCTACAAAGTTTATAA 1437 0.4078 MQDMKKQQKQKQKQLVNEESKKKERHIVTWTQEEDDILREQIGIHGTENWAIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDMLLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNTAYINSNNKRIFLHQNCHTDAASESAVALKKMRRSHIPDSAEKINFGDRSHKQNGIPINQQPRAPFAVLAQNSHNVNMPDQHHVCTLKFSGYAQNNKIQGTFLKKDDPKISALMQQAELLSSLALKVDAENMDQSLENAWKVLQEFLNRTKESDIPRYKIPDLQLVDLKDLLEDLKSSSEEIQPCWRQMELYEDSPGSSEYSTGSTLLPHAAGENLEHSLHQDIGTELKCIQIGDQKGFRGCDQGGLSSATLGQDLFPCCEEQINNDGIVSILSSTEEFSSPLQVTPLFRSLAAGIPSPQFSESERNFLMKTLGMESPSLNPSTNPSQPPLCKRALLQSL* 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1495 478 ProSiteProfiles Myb-like domain profile. 30 73 IPR001005 -
Apr7g1495 478 Gene3D - 16 78 - -
Apr7g1495 478 Coils Coil 1 21 - -
Apr7g1495 478 Pfam Myb-like DNA-binding domain 30 90 - -
Apr7g1495 478 CDD SANT 29 73 IPR001005 -
Apr7g1495 478 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 22 77 IPR017930 -
Apr7g1495 478 Gene3D - 81 150 - -
Apr7g1495 478 SUPERFAMILY Homeodomain-like 26 120 IPR009057 -
Apr7g1495 478 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 78 128 IPR017930 -
Apr7g1495 478 MobiDBLite consensus disorder prediction 1 21 - -
Apr7g1495 478 ProSiteProfiles Myb-like domain profile. 74 124 IPR001005 -
Apr7g1495 478 PANTHER MYB PROTEIN-RELATED 9 475 - -
Apr7g1495 478 CDD SANT 82 123 IPR001005 -
Apr7g1495 478 PANTHER TRANSCRIPTION FACTOR MYB88 9 475 - -
Apr7g1495 478 SMART sant 78 126 IPR001005 -
Apr7g1495 478 SMART sant 26 75 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1495 Apr-Chr7 22098960 22105304 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1495 15 325 MYB Transcription Factor Family AT2G02820 63.924 7.84e-138 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Apr7g1495 Myb_DNA-bind_6 8.3e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1495 K09422 - gmx:100807667 830.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1495 7 22098960 22105304 Apr7g1495 7 22098960 22105304 ECH
Apr7g1495 7 22098960 22105304 Apr7g1495 7 22098960 22105304 PCT