Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1490 ATGTGGAACCGAGGATTCAATGTTTGGATCAAAGGTTGCACTTTGTTGGCCTTGATATCTATAATTTCTGGTCTGGAAGAACTGGGATCGACCCGCGTCGTCTTTCAGACAAATTATGGGGATATTGAGTTTGGTTTCTTTCCAACTGTTGCACCCAAAACAGTTGACCACATTTTTAAACTTGTGCGACTTGGAGGCTATAACACTAATCATTTCTTTCGGGTTGACAGGGGATTTGTAGCCCAAGTAGCAGATATTACGAACGGAAGATCTGCTCCCATGAACGAGGAACAAAGAAGAGAGGCTGAAAAGACTGTTGTTGGTGAATTTAGCGAAGTCAAACATGTTCGCGGTATTCTTTCCATGGGAAGGTATGATGATCCAGACAGTGCTTCATCATCATTTTCAATACTACTTGGAAATGCTCCTCATCTTGATGGCCAGTATGCAATATTTGGAAGAGTTACTAAAGGTGATGATACATTGACTAAGCTGGAGCAACTACCTACTCGTAAAGAGGGTATATTTGTAATGCCAACAGAACGCATCACTATCCTTTCATCATATTACTATGACACGGAAACTGAAAATTGTGAGGAAGACAGATCAATTTTGAAGCGCAGGCTAGCTGCATCAGCTGTTGAAGTTGAAAGACAGAGGATGAAATGCTTCCCCTGA 678 0.4159 MWNRGFNVWIKGCTLLALISIISGLEELGSTRVVFQTNYGDIEFGFFPTVAPKTVDHIFKLVRLGGYNTNHFFRVDRGFVAQVADITNGRSAPMNEEQRREAEKTVVGEFSEVKHVRGILSMGRYDDPDSASSSFSILLGNAPHLDGQYAIFGRVTKGDDTLTKLEQLPTRKEGIFVMPTERITILSSYYYDTETENCEEDRSILKRRLAASAVEVERQRMKCFP* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1490 225 CDD cyclophilin 34 187 - -
Apr7g1490 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 46 61 IPR002130 GO:0000413|GO:0003755
Apr7g1490 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 72 84 IPR002130 GO:0000413|GO:0003755
Apr7g1490 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 IPR002130 GO:0000413|GO:0003755
Apr7g1490 225 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 147 162 IPR002130 GO:0000413|GO:0003755
Apr7g1490 225 Gene3D - 22 198 IPR029000 -
Apr7g1490 225 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 23 225 IPR044233 -
Apr7g1490 225 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP23 23 225 - -
Apr7g1490 225 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 33 187 IPR002130 GO:0000413|GO:0003755
Apr7g1490 225 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 34 190 IPR002130 GO:0000413|GO:0003755
Apr7g1490 225 SUPERFAMILY Cyclophilin-like 32 192 IPR029000 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1490 33 191 U-box Gene Family AT5G67530 28.743 1.49e-10 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1490 - - gmx:100819238 414.075
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1490 7 22007526 22013135 Apr7g1490 7 22007526 22013135 ECH