Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1485 ATGGAATTGGAAGCTGATCATCAAAATGGGATCCGAAGCAGACCCAATTTTCCTCTCCAGCTTTTAGGAAAAAAGGATGTTGATGACGTCACAGAGCAACAACCTTGTTCCACTGCCACAAACGACGGCGCCGCCGCCACCACTGCAGTCCCCAACAGCAACCTCCAATTGGCGGAGCTGCCGAAGAAGCCGCCACCAAAGCGGAGCTCTACAAAAGACCGCCACACAAAAGTAGACGGGCGTGGTCGCCGGATCCGTATGCCGGCGGCCTGCGCCGCCAGAGTGTTCCAGCTGACGCGTGAGCTGGGACACAAGTCTGACGGCGAGACCATAGAGTGGCTCCTCCAGCAGGCGGAGCCGGCGGTCATCGCCGCCACGGGCACTGGCACCATTCCTGCCAACTTCACCTCCCTCAACATCTCGCTCCGCAGCTCCGGCTCCACCATGTCGGCGCCGTCGCACTACTTCCGCGGCAGCTACTTCAACCCTAGCACCTTCTCCTCAACATCCGCCGCCGCCGCGCAGTTGAGGAACCGCGCCGAGTGGGACCGGAACATGAACATTAACATGAATATGGTAATGGATCAGGATTCTCGTAGGACCATGTTAGAGAACACTTCTTCCATCTCCGCAATTTTGAATTTCAACCCTATTGGTAACGTGAATGTAATTCAACAAGCCAAACAAGAGCTTCGAGAAGAATCCGGTGGCGGCGGCGGTCTTGAATTGGTAGCTTCAGATTCTGATGGAAGCTTAGGAAGAAAGAGAAGGCCAGAGCAAGAACTATCACAAATGGGAAGCTATTTGATACAATCAAGTACAGGGTCACTTCCTTCAAGCCATGCTTCCAATACGGCAGCGTTTTGGATGGTAGCGGGTCATGGTAACCAAGGTATGAATGGTGGCGGCGGTAGCAATGGTAGTGATAATCCCATTTGGGCAATTCCCTCTGTTGCAAATAGTGGGGTATATAGAGGGGCTATGTCTGCTCCTGGCGGGATTCATTTCATGAATTTTGCATCTCCGGTGTCTCTTATGCCCGGAGGACAACTAGGTTCCGGCGTCGTTGGTGGCGGGGGAGGCGGTGGTGGTAATAGTGGCTGTAGTCAGCTTCTAAGTGAAAGCAATTTAGGCATGCTTGCAGCCCTTAATGCCTATAGGCAGATTCCGGCGAACGGTGTTTCGCAGTCTCCAGCCGGCGCGGGGCAACATCACGGAGATGATGGACGTGACTCAACTAGTCAACATTCCTGA 1254 0.5383 MELEADHQNGIRSRPNFPLQLLGKKDVDDVTEQQPCSTATNDGAAATTAVPNSNLQLAELPKKPPPKRSSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRGSYFNPSTFSSTSAAAAQLRNRAEWDRNMNINMNMVMDQDSRRTMLENTSSISAILNFNPIGNVNVIQQAKQELREESGGGGGLELVASDSDGSLGRKRRPEQELSQMGSYLIQSSTGSLPSSHASNTAAFWMVAGHGNQGMNGGGGSNGSDNPIWAIPSVANSGVYRGAMSAPGGIHFMNFASPVSLMPGGQLGSGVVGGGGGGGGNSGCSQLLSESNLGMLAALNAYRQIPANGVSQSPAGAGQHHGDDGRDSTSQHS* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1485 417 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 4 417 - -
Apr7g1485 417 MobiDBLite consensus disorder prediction 1 80 - -
Apr7g1485 417 MobiDBLite consensus disorder prediction 32 55 - -
Apr7g1485 417 MobiDBLite consensus disorder prediction 65 80 - -
Apr7g1485 417 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 417 IPR005333 GO:0003700
Apr7g1485 417 MobiDBLite consensus disorder prediction 234 262 - -
Apr7g1485 417 Pfam TCP family transcription factor 70 191 IPR017887 -
Apr7g1485 417 MobiDBLite consensus disorder prediction 392 417 - -
Apr7g1485 417 ProSiteProfiles TCP domain profile. 71 125 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1485 Apr-Chr7 21934902 21937528 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1485 263 417 TCP Transcription Factor Family AT1G69690 36.310 8.81e-09 54.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Apr7g1485 TCP 1.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1485 - - gmx:100781296 610.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1485 7 21934902 21937528 Apr7g1485 7 21934902 21937528 ECH
Apr7g1485 7 21934902 21937528 Apr9g3010 9 36954815 36957049 PCT