Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1473 ATGGAAGAGAGAAATGATGCTGAGAAACTTGATGAAGTTATGCTACCAGGGTTCAGGTTTCATCCAACTGATGAGGAGCTTGTTGGGTTTTACCTGAAGAGGAAGATTCAGCAACGCCCTTTGACTATTGAGCTCATCAAACAGCTTGATATCTATAAATATGACCCTTGGGATCTTCCAAAGTTGGCCACTACAGGAGAAAAAGAGTGGTATTTCTACTGTCCCAGGGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACTGGAGCTGGCTTTTGGAAAGCTACAGGAACTGATAGGCCTATCTATTCCTCAGAAGGTTCCAAGTGTATTGGGCTGAAGAAATCCCTTGTATTTTACAAAGGCAGAGCTGCCAAAGGAGTCAAAACTGATTGGATGATGCACGAGTTCAGGCTACCTTCTGTCACAGACTCACTTTCCCCAAAGAAGTACATTGACAAGACCATTCCTGCTAATGAATCTTGGGCTATCTGCAGGATATTCAAGAAAACCAGTTCTACAGCTCAAAGAGCTTTGTCTCACTCTTGGGTCTCATCCATACCTGAAACAAGAACCTCTGATATGCTAACCAAAATTCAAGACAGCACCCAGTTTTGTTCAACCAACATGCCTTTGACAAAGAAAACTAGCCTAGCCAGCCAGTTCTTTACTAACAACAACGATACTCAACACTTAACCACTAATAGTAGTAGTTGTAGTACTCTTTGTCCTTTAGATGTTGCCTCATATAAATCCATTATTAACCCTTTGCTTTACACAAAAGCCTTTGATCACTTACCACCAATTTCAAATGGAGACCTTAGCACTAGCTTGTTATTCTCATCTCCACTTGAAACATCTAATACAAATAATGCCAAATCTACAATGGATGTTTCTGCCATGTTGTTGAATATGTCATCCTCTATGCTTGGAGATTTTAACAAGAGTTCAGAGGGAACAACCACAATCTTTGGTGGGTTGCAAGAGCACTATAGTGGCTATTCAATACCATTTCTACGTGATATGCAAGCCACAGTTGGCAACCAATATGATAATAATGCAATGGTAAAGGTTCCTAATGTGAATGTGCCTCTTGTTGATGACCAAGAGTTGGAAACAGTACGATCCATTGGGTTTCCATTCAGTAGTATGCCTTTCAATGTTGGTGATGCATGGAAGTCAAATATGCTTTGGGATACTTCATCTTGTCCTTGTGATGTGCCCTCTAGTTATTCCACAACCAAGTGCTATACTTAG 1263 0.407 MEERNDAEKLDEVMLPGFRFHPTDEELVGFYLKRKIQQRPLTIELIKQLDIYKYDPWDLPKLATTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYKGRAAKGVKTDWMMHEFRLPSVTDSLSPKKYIDKTIPANESWAICRIFKKTSSTAQRALSHSWVSSIPETRTSDMLTKIQDSTQFCSTNMPLTKKTSLASQFFTNNNDTQHLTTNSSSCSTLCPLDVASYKSIINPLLYTKAFDHLPPISNGDLSTSLLFSSPLETSNTNNAKSTMDVSAMLLNMSSSMLGDFNKSSEGTTTIFGGLQEHYSGYSIPFLRDMQATVGNQYDNNAMVKVPNVNVPLVDDQELETVRSIGFPFSSMPFNVGDAWKSNMLWDTSSCPCDVPSSYSTTKCYT* 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1473 420 Gene3D NAC domain 23 176 IPR036093 GO:0003677|GO:0006355
Apr7g1473 420 ProSiteProfiles NAC domain profile. 14 172 IPR003441 GO:0003677|GO:0006355
Apr7g1473 420 PANTHER PROTEIN FEZ ISOFORM X1 1 418 - -
Apr7g1473 420 SUPERFAMILY NAC domain 13 172 IPR036093 GO:0003677|GO:0006355
Apr7g1473 420 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Apr7g1473 420 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1473 Apr-Chr7 21817809 21819327 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1473 1 315 NAC Transcription Factor Family AT1G26870 56.923 2.27e-111 332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr7g1473 NAM 7.4e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1473 - - gmx:100783995 639.032
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1473 7 21817809 21819327 Apr7g1473 7 21817809 21819327 ECH