Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1472 ATGATAAAGACAACATCCTCCTCCTCCTCTTCCTTTACTCATCAATGGGTTTATGATGTTTTCATTAGTTTTCGAGGTGAGGATACTCGAATGGGATTCACTGGAAGCCTTTATAATGCTTTGTGTGCAAAAGGAATTAACACCTTCTTAGATGATCATGAGCTTAAGAAAGGTGAAGAGATCACAGCAGCTTTAATGAAGGCAATCCAAAAATCTAGGATTGCAATTGTGGTATTTTCAAAAAATTATGCATCTTCTACTTTTTGTTTAGAAGAACTTGCGAAAATTATGGAGTGCTTAAAACGTAAGGGTAGATTGGTATGGCCAGTTTTTTATCAAGTGGATCCATCTCATGTGCGCCACCAAAAAGGGAGTTATGGTGAAGCATTGGCAAAGCATGAAATAAAAGTGAATGATAAGGATAAGGTGAAAAGATGGAGGTTTGCTTTGCATAAAGCAGCTAATCTCTCCGGTTGGCATTTCCAACATGGGTATGAATATGAATTTATTGGGAAGATCATTGAAGGGGTGTCTAAAAAGATCAATCGCATCCCTTTATATGTTGCTAATTATCCAGTAGGGTTAGAGTCTCGAGTGCAAAAAGTAAACTCACTCCTAGATGTTGAATCAAATGACGGGGTTCATGTGATAGGGATTTATGGAATTGGTGGTATTGGTAAAACAACACTTGCATGTGCAGTATATAATTTAATTGCTGATCAATTTGAAAGTCTTTGTTTTCTTGCTGATATTAGAAAAGATTCAATTAAGTATGGGTTGGTACAACTCCAAGAAACACTTCTTTCTGATTTAGTTGGAGAAGAAGACATTAAGTTGGGGAACGTAAATAAAGGAATTCCAATAGTCAAAAGGAGGCTCGTTAAAAGGAAAATTCTTTTGATTTTGGATGATGTTGACAAATTGGAGCAATTAAAAGCACTTGCTGGTGGACTTGATTGGTTTGGTTCTGGAAGCAAAATTATTATCACAACAAGGGACAAGCATTTGCTACATGTTTATGGTGTTAAAAGAACCTATGAAGTTGAAGGATTGAATCATGAAGAAGCCCTTGAATTGTTTAGTTGGAATGCTTTTAAAAGAAATCAAGTTAAGTCTAGTTATTTGGACATTTTAAAGAAAGTAATACTTTATTCTAATGGCCTTCCATTGTCTTTGGAAATAATAGGTTCTGACTTATACGGCAAAACAAAGTTGGAATGGAAGTCTGCACTAGATTCTTATGAAAAAATTCCTCATAAAAATATTTTTGAAATCCTAAGAGTAAGTTACGATGGCTTAAAGGAATTTGAGAAGGAAACTTTTTTAGACATGGCTTGCTTCTTTAAAGGGTACTACCTAAATGATGTCATAAACATAATACGCGGTGGTCGTGGCTTTGCCCCCGAGTATGGAATCCAAGTGTTGATTGATAAATGTCTCATAAAAATTGATCAACATCGTGTGAGAATGCATGACTTGATTGAGGATATGGGTAGAGAACTTGTACGGCTAGAATCACCATCAAAGCCATGTGAACGTAGTAGATTATGGTTCTCTAAAGATATTGTTCATATTTTCAAAGAGAACAAGGGATCTGATAAAACTGAGATCATCATGTTGCACATGCTCAAAGATAAAAAAGTGAGATGGGATGGCAATGCATTAAAGAAGATGGAAAATCTCAAAATACTTCTCATAGAAAATGCCCGCTTCTGCAAAGGACCTAATCATCTCCCAAAAAGTTTAAGAGTGCTAAAATGGCGAGAATATCCTGAACCATCTCTACCGTCTAATTTTGATCCAAAGAAACTTGTCATACTTGACTTGCCCATGAGTTCCATTAAGTTGAACAATCATGCAATCATGAAATTTAAGTCTTTGACTGAAATGAAGTTAAGTGGTTGCCTACTACTAAAACAAGTACCCGACATGTCTGGTGCACCAAATTTGAAGAAATTGCATCTTGATTTTTGCAAGAATTTAGTTGTAGTCCATGATTCTGTTGGATTCCTTGACAAACTTGTAGATTTGAATCTTACTCATTGTTGCAGTCTCAAGAATCTTCCACGTGGCATCTACTTAACTTCTCTTAAAACCTTGTCTCTTGGGTATTGTGTAAGTCTCAAGAATTTTCCAGAAATTTTGGGAAAGATGGTAAAAATCAACTACCTTTGTTTGAGTGGTAGCACTATAAGAAAATTGCCCTTTTCAATTGGAAATCTTGTTGGGCTTACATTTTTGTCTGTGGATGACTGCAAAGGGCTAATTGAACTACCAAGTAGTATATTTACGTTGCCAAAGTTGAAGACTTTTCTAGCTAACTCTTGTACTATGCTTGCAAAAATAAAGAACGGCCAAGGTCAAGATCAAGGAACAATGTCTTCAAATGCGAGGAATGTCATTCTTTGTTCAGTTGGAAGAGATCGCATATGCTATGAGACAGATGAATTTCTTGCTACCCTTCTTCCTTGCTTACCACTTGTCACATTTTTGTTCCTTAATAATAGCAATATCACAGTCCTTCCATCTTGCATCAATTCTTGTCGCTCTTTGACAAAACTATATTTGGATGAATGCAAGCAGCTTCGAGAAATTAAAGCCTTGCCGCCAAATATAAAATATCTTTCAGCAGTGAATTGCACATCATTGACTTCCCAGTCCAAGGAAATGCTATTGGCTCAGGCACTAGACAGGAGAAGGGTCAGATATTTTTGTTTTCCAGGATCTACAATTCAAAGATTGTTCAATCATTGCAGCAGAAAAGAATCCTTGTCTTTCTGGTTTCGTAACAAATTCCCAGCAATTACTCTTTGCATCAATGGAGCTTTGGGTAGTTTTCTTCATTATGAGTTTGACCTGATCATTAACAGTAGTCAACGGTTCCCAAATATTGTTCAAGTTAGGTCCACAAGTTTATTTCAGACAAATCATTTAATTGTGTTTGATCTGTGGCTTGAATTTGGCAGTGGTAAATTTGAAAAGCTACACACTGAGAATGGATGGAATCATGCTGAGATTTCATTGGTGGATGGTGGAGGTAAAACAAAAATGAAATGGATGGGAGTTCATGTACAGGAACAAAAAACAAGCATGCCAAATATTCGATTTACACACACGGATCAATGTTTCAAGTTGCGAAAGGTTGTGAACAAAATTGCAATTGCACTGTGGCTTGGAAAACTTTCAAAACGGTGA 3195 0.3631 MIKTTSSSSSSFTHQWVYDVFISFRGEDTRMGFTGSLYNALCAKGINTFLDDHELKKGEEITAALMKAIQKSRIAIVVFSKNYASSTFCLEELAKIMECLKRKGRLVWPVFYQVDPSHVRHQKGSYGEALAKHEIKVNDKDKVKRWRFALHKAANLSGWHFQHGYEYEFIGKIIEGVSKKINRIPLYVANYPVGLESRVQKVNSLLDVESNDGVHVIGIYGIGGIGKTTLACAVYNLIADQFESLCFLADIRKDSIKYGLVQLQETLLSDLVGEEDIKLGNVNKGIPIVKRRLVKRKILLILDDVDKLEQLKALAGGLDWFGSGSKIIITTRDKHLLHVYGVKRTYEVEGLNHEEALELFSWNAFKRNQVKSSYLDILKKVILYSNGLPLSLEIIGSDLYGKTKLEWKSALDSYEKIPHKNIFEILRVSYDGLKEFEKETFLDMACFFKGYYLNDVINIIRGGRGFAPEYGIQVLIDKCLIKIDQHRVRMHDLIEDMGRELVRLESPSKPCERSRLWFSKDIVHIFKENKGSDKTEIIMLHMLKDKKVRWDGNALKKMENLKILLIENARFCKGPNHLPKSLRVLKWREYPEPSLPSNFDPKKLVILDLPMSSIKLNNHAIMKFKSLTEMKLSGCLLLKQVPDMSGAPNLKKLHLDFCKNLVVVHDSVGFLDKLVDLNLTHCCSLKNLPRGIYLTSLKTLSLGYCVSLKNFPEILGKMVKINYLCLSGSTIRKLPFSIGNLVGLTFLSVDDCKGLIELPSSIFTLPKLKTFLANSCTMLAKIKNGQGQDQGTMSSNARNVILCSVGRDRICYETDEFLATLLPCLPLVTFLFLNNSNITVLPSCINSCRSLTKLYLDECKQLREIKALPPNIKYLSAVNCTSLTSQSKEMLLAQALDRRRVRYFCFPGSTIQRLFNHCSRKESLSFWFRNKFPAITLCINGALGSFLHYEFDLIINSSQRFPNIVQVRSTSLFQTNHLIVFDLWLEFGSGKFEKLHTENGWNHAEISLVDGGGKTKMKWMGVHVQEQKTSMPNIRFTHTDQCFKLRKVVNKIAIALWLGKLSKR* 1065
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1472 1064 Pfam TIR domain 18 182 IPR000157 GO:0007165
Apr7g1472 1064 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 443 IPR027417 -
Apr7g1472 1064 SMART till_3 17 156 IPR000157 GO:0007165
Apr7g1472 1064 Pfam NB-ARC domain 196 430 IPR002182 GO:0043531
Apr7g1472 1064 SUPERFAMILY "Winged helix" DNA-binding domain 421 526 IPR036390 -
Apr7g1472 1064 Gene3D Ribonuclease Inhibitor 694 905 IPR032675 -
Apr7g1472 1064 Gene3D Ribonuclease Inhibitor 551 693 IPR032675 -
Apr7g1472 1064 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 28 1008 IPR044974 GO:0006952
Apr7g1472 1064 Gene3D - 350 434 IPR042197 -
Apr7g1472 1064 Gene3D - 182 344 IPR027417 -
Apr7g1472 1064 SUPERFAMILY L domain-like 536 889 - -
Apr7g1472 1064 SUPERFAMILY Toll/Interleukin receptor TIR domain 7 159 IPR035897 -
Apr7g1472 1064 Gene3D - 15 181 IPR035897 -
Apr7g1472 1064 PRINTS Disease resistance protein signature 216 231 - -
Apr7g1472 1064 PRINTS Disease resistance protein signature 292 306 - -
Apr7g1472 1064 PRINTS Disease resistance protein signature 385 399 - -
Apr7g1472 1064 PRINTS Disease resistance protein signature 692 708 - -
Apr7g1472 1064 ProSiteProfiles TIR domain profile. 16 181 IPR000157 GO:0007165
Apr7g1472 1064 PANTHER ARCHAEAL ATPASE 28 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1472 Apr-Chr7 21809634 21814948 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1472 12 784 WRKY Transcription Factor Family AT4G12020 31.047 1.23e-92 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1472 - - gmx:100814790 1346.64