Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1468 ATGGACTTAAGCCCCAGCAACACAAATACTGAGAAAACTCAAACCCCACCACAAGCCCAACCCACCAACAACAAAGACTCAAAGTCTTCATCTTTCACCAACGGTTCCCTCAAGCGCCACCACCTCCACCCCACCACCGTCCCACCTCCACCACAGCCACCGTCCACGGTGGTTTCCTACAAGGAGTGCCTCAAAAACCATGCAGCCAGCTTAGGTGGCCACGCGCTCGATGGGTGCGGTGAATTCATGCCCTCCTCCTCTTCCTCCAACCCCGCAGAACCACGCTCTCTAACGTGCGCCGCGTGTGGCTGTCACCGTAACTTCCACCGCCGTGACACGCAAGAATACTCCAATCCCAACTTCATAAGCTTCTACCACTCACCACCACCACCATCACAACCCCACCATGGCCCAAGTTCGAGCCCAAGCCCAGGCCTGAGCGCAGATCAAAGCCCGAGCCCAATTTCAAGCCCATCCCCGCCACCACTCTCGCACCATTTCCCACCTTCCTTTCACCACCACCAATCATTTGCACCCCACATGCTCTTAGCCCTTGGAAATGATCATCACAGGAGTTTCAATTTCAATTTCAACTCTTCCATGATAGAGAAGAACCTGAGTGGGAAAAAGAGGTATAGAACCAAGTTCACCCAAGAGCAGAAGGACAAGATGCATAGTTTCTCTGAGAAGTTGGGTTGGAGAATGCAGAAAGGGGATGAAGGATTGGTTCAAGAATTCTGCAATGAGATTGGCGTTTCCAGAGTCGTATTCAAGGTTTGGATGCACAACAATAAGAACACTTTCAGGAAAAGATCATCCGAACCAGGTGAAAAGATAAATGCGAGTCGTGGTGATGATAGTAATAATCTTACAACTTAA 879 0.504 MDLSPSNTNTEKTQTPPQAQPTNNKDSKSSSFTNGSLKRHHLHPTTVPPPPQPPSTVVSYKECLKNHAASLGGHALDGCGEFMPSSSSSNPAEPRSLTCAACGCHRNFHRRDTQEYSNPNFISFYHSPPPPSQPHHGPSSSPSPGLSADQSPSPISSPSPPPLSHHFPPSFHHHQSFAPHMLLALGNDHHRSFNFNFNSSMIEKNLSGKKRYRTKFTQEQKDKMHSFSEKLGWRMQKGDEGLVQEFCNEIGVSRVVFKVWMHNNKNTFRKRSSEPGEKINASRGDDSNNLTT* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1468 292 MobiDBLite consensus disorder prediction 1 40 - -
Apr7g1468 292 MobiDBLite consensus disorder prediction 119 171 - -
Apr7g1468 292 Gene3D - 196 270 - -
Apr7g1468 292 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 9-LIKE 9 275 - -
Apr7g1468 292 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 209 266 IPR006455 -
Apr7g1468 292 MobiDBLite consensus disorder prediction 124 138 - -
Apr7g1468 292 SUPERFAMILY Homeodomain-like 200 270 IPR009057 -
Apr7g1468 292 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 60 112 IPR006456 -
Apr7g1468 292 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 60 112 IPR006456 -
Apr7g1468 292 Pfam ZF-HD protein dimerisation region 58 113 IPR006456 -
Apr7g1468 292 MobiDBLite consensus disorder prediction 268 292 - -
Apr7g1468 292 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 9 275 - -
Apr7g1468 292 MobiDBLite consensus disorder prediction 139 153 - -
Apr7g1468 292 MobiDBLite consensus disorder prediction 1 58 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1468 Apr-Chr7 21783970 21785393 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1468 1 269 ZF-HD Transcription Factor Family AT3G28920 43.590 3.72e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Apr7g1468 ZF-HD_dimer 1.1e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1468 - - lang:109355848 292.737
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1468 7 21783970 21785393 Apr7g1468 7 21783970 21785393 ECH