Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1457 ATGGATCAACAAAACATGCAAAATCAAAGCATGCATTTTGTGCTATCCACCGATGCCAAACCAAGGCTAAAATGGACTCCTGAGCTTCACCAACGGTTCATTGAAGCAACTAATCAGCTTGGAGGTGCAGATAAAGCAACCCCAAAGAGTCTTATGAGGGTGATGGGAATTCCAGGGCTTACTTTGTACCACCTGAAGAGCCATTTACAGAAATATAGACTTGGGAAAAGCCAGCAGCTAGAAACCTGCTCTGACAACAAACAAGAAGATTACAGTGAAACCAAGAGCAGTGATGATCATTGCAGCAGGGAAATCAGTCTTGGGGCCCAGAATCAAACCACAGAAAACTTGCAGATAGCTCAGGCTCTCCAAATGCAAATGGAAGTACAAAGGAAACTTTATGAACAAATTGAGGTGCAGAAACATTTGCAGCTAAGAATTGAAGCTCAAGGGAAGTATTTACAGTCAGTGCTAAAGAAGGCACAAGAAGCACTTGCAGGGTACAACTCTAGCCCAGTAGGTATAGAACTCACAAAAGCTGAACTTTCTCAGCTAGTTACCATCATCAACAATGCTTGCCCAAGTTCTCCAATCTCAGAACTCACAGAAACAAGAAGGTTGAGTTTGAACCAAGGAGAGAGGAAAAGAGACAGAGGAACCATGTGTTCCCTTGAAAGTTCTTTGACATCTTCTGAAAGCTCAGGGAGAAAAGAAGAGAAACAACTAATGGAAGACAAAAGTTCACTTGAATTGCCACTGATGAACATTCAAAGTGATGATAAAGCATCCAATGGAGACTCAAGTGATGAGGGTAGTGGAAGAAAGAGAAGTGCAGCCACCAAATCTGATGATGGTAGCTGTGTTGTTGAGCAACCATGTGGGAAAAGATGTGGCAACATGTTGAGGAAAGCCATGTTGTCACAAATGCTTGACTTGAACAGCCAGTGTCAGAGTGATGTGGACTCAACAAGTTCTAAAACATTAGACTTAAATTGCAGTTTAAACTTTTGGGAACCATGA 1020 0.4206 MDQQNMQNQSMHFVLSTDAKPRLKWTPELHQRFIEATNQLGGADKATPKSLMRVMGIPGLTLYHLKSHLQKYRLGKSQQLETCSDNKQEDYSETKSSDDHCSREISLGAQNQTTENLQIAQALQMQMEVQRKLYEQIEVQKHLQLRIEAQGKYLQSVLKKAQEALAGYNSSPVGIELTKAELSQLVTIINNACPSSPISELTETRRLSLNQGERKRDRGTMCSLESSLTSSESSGRKEEKQLMEDKSSLELPLMNIQSDDKASNGDSSDEGSGRKRSAATKSDDGSCVVEQPCGKRCGNMLRKAMLSQMLDLNSQCQSDVDSTSSKTLDLNCSLNFWEP* 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1457 339 Gene3D - 19 77 - -
Apr7g1457 339 Pfam MYB-CC type transfactor, LHEQLE motif 117 163 IPR025756 -
Apr7g1457 339 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 5 336 IPR044848 GO:0003700
Apr7g1457 339 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 20 75 IPR006447 GO:0003677
Apr7g1457 339 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 5 336 - -
Apr7g1457 339 MobiDBLite consensus disorder prediction 207 221 - -
Apr7g1457 339 MobiDBLite consensus disorder prediction 86 102 - -
Apr7g1457 339 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 17 77 IPR017930 -
Apr7g1457 339 Pfam Myb-like DNA-binding domain 22 73 IPR001005 -
Apr7g1457 339 Coils Coil 120 140 - -
Apr7g1457 339 MobiDBLite consensus disorder prediction 83 102 - -
Apr7g1457 339 MobiDBLite consensus disorder prediction 232 246 - -
Apr7g1457 339 MobiDBLite consensus disorder prediction 263 281 - -
Apr7g1457 339 MobiDBLite consensus disorder prediction 203 287 - -
Apr7g1457 339 SUPERFAMILY Homeodomain-like 19 75 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1457 Apr-Chr7 21692810 21694747 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1457 11 296 G2-like Transcription Factor Family AT1G69580 50.993 2.19e-79 244
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Apr7g1457 Myb_DNA-binding 1.1e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1457 - - gmx:100787178 577.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1457 7 21692810 21694747 Apr7g1457 7 21692810 21694747 ECH