Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1454 ATGCAGGATCAAAAGCTTGAATCAACTAAGGGGGAAATGGGAGAGGCTAGAGAAGAAAACAAGAGGTTGAAGTTCTTATTGGAGCGGCTTGTAAATGATTATCAATCACTACAAACAAACTTCTTTGACATCCTTCAGCAAGATAAACCCGAAGATGCCACAAAAGCTAAAGGTATAACAACTAGGCATGAAGAAAATGAAGAAAGTGACCTTGTCTCACTTTCTCTAGGGATATCATCCCAAGGGAAGCATACCATGGAGGAGGAAAAGAATAGTAATATAGCTGAAAAGAGAGAATATAGAAGCATGGATAAAAAACTTGCACTTGGGTTAGATATTAATTTTGACCCTATAATTGATCCAGCTGAAGCTGTAAATAATTCCAGCTCTGAAACTAGCTTTGGTGAGGAAAGGAAGGAGGAGCCAAATGAGATGTGGCCCCCCAGTAAAGTTTTCAAGACAAAGAAAACTGGGGAAAAAAGTGAAGCTTCTCAACATATTCAGCTCAAGAAGGCTAGGGTTTCTATCAGAACCAGATGTGATACCCAAACGATGAATGATGGATGCCAATGGAGAAAATATGGACAGAAAATAGCAAAAGGAAATCCATGCCCCCGAGCTTATTATCGATGCACTGTGTCACCATCATGTCCTGTAAGAAAACAGGTGCAAAGATGTGCTGAGGATATGTCCATATTGATTACCACCTATGAAGGAACCCACAGTCATCCACTTCCTACGTCAGCAACTGCAATGGCCTCCACAACTTCTGCTGCCGCTACATTACTTCAATCTCCCTCACTGAGTTCACAAGGACTAGAAAATTCAGCTATAGCCTCCATCATCAACTCTAGTGCTGCTTACAACCCCAATGCTCTAAACTTCTCAACGTACCAAATTTCAAAACCACATCAATTCTACTTCCCCAACTCTTCTATTTCCACCTTAAATTCACACCCCACAATCACTTTGGACCTTACAACACCCCCAACTTCCTCAAATTCAGGAAATTTTACCTCAACCTTCTCTTTCATGCCAATATACTCATCAACAAACCTCAATTTTTCCTCATGTTTCTCTCCTCTACAATCTAGTATGCCACATTCTCCATGGAGCAGTTATAGTGGTTATTTCAATACAAAAACACTACCCCAAAATAGAAACCAAGGCGGTTACTTGGTAAACACTGGAAAGCAACCATTTCAGGAGCATCCCCATCAACCTATTTACATGAGCAACCACACCATTTCTCAACAGTCTTTGCCTGCAACCAAGGCAATCATCACAAGTAACCCAAATTTTCAATCAGTATTAGCAACTGCTCTCACAGCATGTGTTGGCAGTGAAGCTGGGGGTGGTAGGTTAAGAGAAACTCGTGTTCTTGAGAGTGCAGAACTGAACTTAAAGTTAAGTAGTGGAAATGTGTCCTACACTTCTAGCCAAAAATAG 1449 0.4092 MQDQKLESTKGEMGEAREENKRLKFLLERLVNDYQSLQTNFFDILQQDKPEDATKAKGITTRHEENEESDLVSLSLGISSQGKHTMEEEKNSNIAEKREYRSMDKKLALGLDINFDPIIDPAEAVNNSSSETSFGEERKEEPNEMWPPSKVFKTKKTGEKSEASQHIQLKKARVSIRTRCDTQTMNDGCQWRKYGQKIAKGNPCPRAYYRCTVSPSCPVRKQVQRCAEDMSILITTYEGTHSHPLPTSATAMASTTSAAATLLQSPSLSSQGLENSAIASIINSSAAYNPNALNFSTYQISKPHQFYFPNSSISTLNSHPTITLDLTTPPTSSNSGNFTSTFSFMPIYSSTNLNFSSCFSPLQSSMPHSPWSSYSGYFNTKTLPQNRNQGGYLVNTGKQPFQEHPHQPIYMSNHTISQQSLPATKAIITSNPNFQSVLATALTACVGSEAGGGRLRETRVLESAELNLKLSSGNVSYTSSQK* 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1454 482 PANTHER WRKY TRANSCRIPTION FACTOR 72B 3 478 - -
Apr7g1454 482 SUPERFAMILY WRKY DNA-binding domain 177 246 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr7g1454 482 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 3 478 IPR044810 GO:0003700
Apr7g1454 482 MobiDBLite consensus disorder prediction 124 166 - -
Apr7g1454 482 Pfam WRKY DNA -binding domain 186 244 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g1454 482 Gene3D WRKY domain 170 247 IPR036576 GO:0003700|GO:0006355|GO:0043565
Apr7g1454 482 SMART WRKY_cls 185 245 IPR003657 GO:0003700|GO:0006355|GO:0043565
Apr7g1454 482 Coils Coil 13 40 - -
Apr7g1454 482 ProSiteProfiles WRKY domain profile. 180 246 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1454 Apr-Chr7 21671827 21673957 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1454 13 450 WRKY Transcription Factor Family AT5G15130 41.525 3.13e-76 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Apr7g1454 WRKY 5.4e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1454 - - gmx:100809801 550.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1454 7 21671827 21673957 Apr7g1454 7 21671827 21673957 ECH
Apr7g1454 7 21671827 21673957 Apr1g0892 1 12011602 12017680 ECH
Apr7g1454 7 21671827 21673957 Apr9g3022 9 37059523 37063938 ECH
Apr7g1454 7 21671827 21673957 Apr9g3022 9 37059523 37063938 PCT
Apr9g2392 9 31432017 31436084 Apr7g1454 7 21671827 21673957 PCT