Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1453 ATGATGTCGCAGCTTCACTCCTCCATCACGTTTAAGCGAACCCACCCTCTCACCACTCCAAAGTTCACTTCTTTGAAGCGCAACAACGTTACGTTTAACACAATCACCTTCTCCATCACACTTCCATCACTCTCTGTCAAATGCCACAGTTCCCAACTCATCCAACCCAAACCATTCCCTTCACCACCACAACAACGTTCTCCAGTTGGGGAATTGCAGCGAAAGTTTTATGTGGGTTACTCCATTTATACAAGGAAGGGTGTACTCACAGTGTCTCCTAGACCTCCGGAATTTGAAACAAAAGATTCTGGGGCATTCAAAGTATCTAGGGAGGGTTATCTGCTCCTCCAGTTTGCTCCTTCAGATGGTACTGATGGTGATAGGCCCCAATATGATTGGAGCAGAAAGCAGATTTTCTCACTGTCAGTCAGTGAAATGGGAACTATAATTGGCCTTGGTGCAAGAGATTCTTGTGAACTTTTTCATGATAGTTTTAAGCAAAAAAGTGAAGTTGAAGTCAGAAAAGTTTTGAAAGTGGAGCCACTTCCCGATGCTACTGGACACTTATTTAACTTACGTGTTGAAAATCAAAACAAGCCAGAGAACATGGACGAAACTCAGGAAAGCATCTATATACCTGTTGCGAGTGCAGAGCTAGCAGTTTTCAGGTCAATTTTCAATTATATCATGCCATACCTTCTAGGTTGGCATGCTTTTGCAAACTCCATAAAGCCAGAGGTATTTAGCCGAGCAAATACTGCCAACCCAAGATTTGCAGCAGATTACGAATGGGACAGATAG 801 0.432 MMSQLHSSITFKRTHPLTTPKFTSLKRNNVTFNTITFSITLPSLSVKCHSSQLIQPKPFPSPPQQRSPVGELQRKFYVGYSIYTRKGVLTVSPRPPEFETKDSGAFKVSREGYLLLQFAPSDGTDGDRPQYDWSRKQIFSLSVSEMGTIIGLGARDSCELFHDSFKQKSEVEVRKVLKVEPLPDATGHLFNLRVENQNKPENMDETQESIYIPVASAELAVFRSIFNYIMPYLLGWHAFANSIKPEVFSRANTANPRFAADYEWDR* 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1453 266 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC 55 266 - -
Apr7g1453 266 Gene3D Transcriptional Coactivator Pc4; Chain A 70 254 IPR009044 GO:0003677|GO:0006355
Apr7g1453 266 SUPERFAMILY ssDNA-binding transcriptional regulator domain 75 266 IPR009044 GO:0003677|GO:0006355
Apr7g1453 266 Pfam Whirly transcription factor 82 225 IPR013742 GO:0003697|GO:0006355|GO:0006952
Apr7g1453 266 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 55 266 IPR013742 GO:0003697|GO:0006355|GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1453 Apr-Chr7 21659196 21664041 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1453 17 266 Whirly Transcription Factor Family AT1G14410 54.582 1.27e-87 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Apr7g1453 Whirly 9.3e-46 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1453 - - gmx:100797370 306.219
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1453 7 21659196 21664041 Apr7g1453 7 21659196 21664041 ECH
Apr7g1453 7 21659196 21664041 Apr3g0883 3 22941460 22944533 PCT