Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1448 ATGGGGTTGGGTGCTGAGAATGGTAAGGTTGTGGAGTCTTGGGATGTCTGTAAATCAAAGGGGAGGAAGAAGAAGAAGAAAGGAGATGAGGGAGTGGTGGAAGAGAGTGGGGCTGGGTGTTGGGTAAGGTTGAGGTTCATTGGGAGCTGCATTTCTTCAAGATCCAAGGTTGATAGCTCAGTGAGTGGCACCAGTACTCATTATGGTAATCACTGTTTCCTTGCAAATTTTGAAAGTAAATTCACTAATGATACAAGTAGAGACCAACCAACAGCTCCAGCAGTCTCTTCTACAACCACTAGTAATGCAGAAAGCAATTCATCCACTTCCAAACTTGAAGAGGAGCTTAAAATTGCTTCCAGGCTTCGAAAGTTCTCTTTCAATGATCTTAAGTTAGCTACAAGAAATTTTCGGCCTGAGAGTTTCCTTGGTGAAGGTGGGTTTGGTTGCGTTTTCAAGGGTTGGATTGAAGAAAATGGAACTGCTCCTGTGAAACCTGGCACAGGACTTACTGTTGCTGTAAAAACCCTCAACCATGATGGGCTCCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTTTCTTGGTGATCTAGTTCATCCAAACCTTGTAAAACTTGTAGGTTACTGCATTGAAGATGATCAAAGGTTACTAGTTTATGAGTTCATGCCTCGGGGTAGCTTGGAAAACCACTTATTCAGGAGATCCTTGCCTCTTCCATGGTCCATTAGAATGAAAATTGCACTAGGAGCTGCTAAGGGTCTTGCTTTTCTTCATGAAGAAGCTGAACGACCAGTAATATACAGGGATTTTAAAACATCAAATATACTGTTAGATGCTGACTACAATGCCAAGCTCTCCGACTTTGGTCTTGCCAAAGATGGTCCAGAAGGTGACAAAACCCATGTGTCCACTCGAGTGATGGGAACCTATGGTTATGCAGCACCGGAATATGTCATGACAGGTCATCTTACATCAAAAAGTGACGTGTACAGTTTTGGAGTGGTACTACTTGAGATGTTGACCGGCAGAAGATCTATGGACAAACACCGACCCAATGGTGAGCATAACCTTGTGGAATGGGCTCGACCACATCTTGGAGAGAGGAGAAGGTTCTACAGGCTGATCGACCCTCGTTTAGAAGGCCACTTTTCCATAAAAGGAGCTCAGAAAGCTGCCCAACTGGCTGCTCACTGCCTTAGTAGAGATCCAAAAGCCAGACCCCTCATGAGTGAAGTTGTAGAAGCTTTAAAGCCCCTTCCAAACCTTAAGGACATGGCAAGCTCTTCATACTATTTCCAAACAATTCAAGCTGACCGCTTTGGGATGAGTCCTAACACAAGAAATGGACGGACACAAGGAGCATTGCTAACCCGCAATGGACAGCAGCAAAGGAGCCTTTCAATACCAAATGGCACTTATGCATCTCCATATCACCATCAGTTTCCCCAACAATCACCAAAACCCAAAGGCAAAGCATAG 1482 0.444 MGLGAENGKVVESWDVCKSKGRKKKKKGDEGVVEESGAGCWVRLRFIGSCISSRSKVDSSVSGTSTHYGNHCFLANFESKFTNDTSRDQPTAPAVSSTTTSNAESNSSTSKLEEELKIASRLRKFSFNDLKLATRNFRPESFLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLVGYCIEDDQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSKSDVYSFGVVLLEMLTGRRSMDKHRPNGEHNLVEWARPHLGERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTIQADRFGMSPNTRNGRTQGALLTRNGQQQRSLSIPNGTYASPYHHQFPQQSPKPKGKA* 494
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1448 493 MobiDBLite consensus disorder prediction 84 110 - -
Apr7g1448 493 CDD STKc_IRAK 143 420 - -
Apr7g1448 493 SUPERFAMILY Protein kinase-like (PK-like) 115 417 IPR011009 -
Apr7g1448 493 Gene3D Transferase(Phosphotransferase) domain 1 223 437 - -
Apr7g1448 493 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 67 483 - -
Apr7g1448 493 Pfam Protein tyrosine and serine/threonine kinase 142 417 IPR001245 GO:0004672|GO:0006468
Apr7g1448 493 Gene3D Phosphorylase Kinase; domain 1 96 222 - -
Apr7g1448 493 MobiDBLite consensus disorder prediction 458 493 - -
Apr7g1448 493 MobiDBLite consensus disorder prediction 458 483 - -
Apr7g1448 493 MobiDBLite consensus disorder prediction 84 109 - -
Apr7g1448 493 ProSiteProfiles Protein kinase domain profile. 137 423 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1448 493 ProSitePatterns Serine/Threonine protein kinases active-site signature. 266 278 IPR008271 GO:0004672|GO:0006468
Apr7g1448 493 PANTHER OS01G0588500 PROTEIN-RELATED 67 483 - -
Apr7g1448 493 ProSitePatterns Protein kinases ATP-binding region signature. 143 175 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1448 Apr-Chr7 21609390 21613734 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1448 84 417 Glycoside Hydrolase AT3G07070 53.412 6.86e-117 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Apr7g1448 PK_Tyr_Ser-Thr 2.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1448 - - gmx:100787151 869.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1448 7 21609390 21613734 Apr7g1448 7 21609390 21613734 ECH