Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1442 ATGAGCCGCAAGAGAGACAAACCCTACTTTTCCCGCCACGTCCCCTACGCCGCCGCCAAGCGCCGCCGCCCATTGCCGGAATCCACGGAGGAGGAGAGGCCCACGGTGAGGCCAGCGCCGCCGTCCGCGGTGGTTATCATGGGCCTCCCCCAAGACTGCTCCGTCCTCGATCTCAAGTCCCGATTCGAGATCTACGGCACTATCTCCCGCATCCGCATCGACCGCGACACCGTCGGCTACATTACCTACCGGAGCAAAGACTCCGCCGACGCCGCCATCGCCGCCGGCCACGACCCTTCCTTCGGAATCACCGTTAACTCCAAAAAGGTTCAGGTGTTGTGGGCAACTGACCCTCTAGCCATGTGGAGGGAAGGAGTTGGTAATAACAAGGATAAAGGGTCTATGTCAAAGCTTGTGCGTGCTGAGGTACCTTTGAGCAAGCATGGGAGAGGTAATAGACTCGCTTCAGCTATAGGGAATACCAAACGTAGTGAGGATAGCAGCTCAAGTACCTCAGTTTTAGAAGTGCCTTTCAGGGGCAGAGAAATTGTTGCTTATGATGATATCCTTTAA 573 0.5602 MSRKRDKPYFSRHVPYAAAKRRRPLPESTEEERPTVRPAPPSAVVIMGLPQDCSVLDLKSRFEIYGTISRIRIDRDTVGYITYRSKDSADAAIAAGHDPSFGITVNSKKVQVLWATDPLAMWREGVGNNKDKGSMSKLVRAEVPLSKHGRGNRLASAIGNTKRSEDSSSSTSVLEVPFRGREIVAYDDIL* 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1442 190 Gene3D - 16 169 IPR012677 -
Apr7g1442 190 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 44 95 IPR000504 GO:0003723
Apr7g1442 190 CDD RRM_SF 44 112 - -
Apr7g1442 190 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 42 117 IPR000504 GO:0003723
Apr7g1442 190 MobiDBLite consensus disorder prediction 152 172 - -
Apr7g1442 190 MobiDBLite consensus disorder prediction 1 38 - -
Apr7g1442 190 MobiDBLite consensus disorder prediction 157 172 - -
Apr7g1442 190 SUPERFAMILY RNA-binding domain, RBD 28 124 IPR035979 GO:0003676
Apr7g1442 190 SMART rrm1_1 43 113 IPR000504 GO:0003723
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1442 1 190 Homeobox Transcription Factor Family AT1G27050 52.683 6.39e-65 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1442 - - gmx:106797175 314.309
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1442 7 21529481 21530979 Apr7g1442 7 21529481 21530979 ECH