Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1413 ATGGCTTCGCAAATGGCGATCCTCTTCCGAACTCGTTCCCTTCTCCCCAAAACGACAACAACAATCAAAAGCATAACCACATTCCCATTCCTCTCGCAGGAACCACAGCTTGTGGACCCCACCCCCGCCCCGACTCACACCTCACTCCCTCCAAACCCAGCCTCTGGAAGTCCTCTCTACAACGAGAACTGGCGCAGCCCAATCCCACCCTCAACCTCCTCCCACGCGCTCACCACGCTCGGCAGCTACAACCGCACCACCTCAGACACCTACGATCCCCACGCGCTCCTCGACCTCTTCGGCGATTGGATGGCCTCGCAGCGTTGGCACGACGTGAAGCAACTCTTCGAGGCATGGGTTAGGTCTCTCGACAAGACGGGTAAACCTAACAAACCCGATGTTAACCTCTTCAACCATTACCTCAGAGCCAATCTCATGATTGGTGCCTCCGTTGATGAATTGCTTGACCTTGTTTCTCAAATGGACCACTTCAACATCTCCCCCAATACTGCGTCGTTTAACCTCGTCCTCAAAGCCATGTACCAGGCCAACGAAACCGTCGCTGCTCAGAAATTGCTCCAACGGATGCTGGAGACAGGAAAGGAATCACTCCCCGATGATGAATCATATGACTTGGTCATTGGAATGCTCTTTAACACATACGAGATTGATGCTGCATTCAAATATATAGATTTAACTTTGAAATCTGGTTACATGTTGTCCATGAAGGTATTTATGGACTCTGTAAAGAGTTGTGTCAATAAGGGCAGGCTTGATACATTGGTGACAATAATCGAAAGGTGCAGGACAACAGATCAAAACAAAGCTCTTTGCCCTTCCTGGAACTCGTGCAATTTTATTACTGAAATTGCAATTCAAGAGGATAATAGCAAGTTAGCTTTTTACGGCCTGGAGTTTATGGCTAGATGGATTGTAAAGGGTGAACGTGCAAGACCCCCTATACTTCTTTCTGTAGATGAAGGTTTAGTTCTGTCAGCTATTTTGACTGCAGGTAGAACATATGATTCTGAGCTTCTAGGGGCAGCATGGGCTGTTTTGATCCGCTCATTGCGTAAAAAGAAAGCTCCTAATCCAGAATCATATCTTGGAAAGATACATGCACTTGCATCATTGGGGAATCTACAAAAGGCTTTTGGTACCCTGAATGAATACGAGTCTGCTTATGGAGATGCTGGTCAAGAAGCTGAAGAGTTGTTCTGCCCATTTACTTCGTTACATCCATTGGTTGTGGCTTGCTCCAAGAAGGGTTTTGAGACTTTGGATAACGTTTATTTTCAACTGGAGAATTTAAATCGTGGAGAAAATCCTTATAAATCTGTTGCTGCACTAAACTGCGTCATTTTAGGATGTGCAAATGTATGGGACCTTGATCGTGCTTACCAAACTTTTGAATCAATTGGATCTACTTTTGGGTTGACCCCTGATATTCATTCTTACAATGGGCTTATGTATGCCTTTGGGAAGCTCAAGAAGACACATGAAGCTTCAAGGGTGTTTGAGCACCTAGTGAGTTTGGGTCTCAAGCCTAATGCAAAATCATATTCTCTGCTTGTTGATGCCCACTTGATTAACCGGGATGTCAAATCTGCTCTGGCAGTGATTAATGATATGACGGCTGCCGGATTTGAACCATCAAAAGAGACACTAAAAAAAGTCAGACGGCGATGCTTACGAGAGATGGACTATGAAAGTGATGACCGAGTGGAATCACTAGCTAGATCCCTGAATTACCGACTGGGTTCAGAAGGCCGGCGGGACATGCTGTTCAATCTTGATTACAGTATGGAGTATCCTTGA 1818 0.4571 MASQMAILFRTRSLLPKTTTTIKSITTFPFLSQEPQLVDPTPAPTHTSLPPNPASGSPLYNENWRSPIPPSTSSHALTTLGSYNRTTSDTYDPHALLDLFGDWMASQRWHDVKQLFEAWVRSLDKTGKPNKPDVNLFNHYLRANLMIGASVDELLDLVSQMDHFNISPNTASFNLVLKAMYQANETVAAQKLLQRMLETGKESLPDDESYDLVIGMLFNTYEIDAAFKYIDLTLKSGYMLSMKVFMDSVKSCVNKGRLDTLVTIIERCRTTDQNKALCPSWNSCNFITEIAIQEDNSKLAFYGLEFMARWIVKGERARPPILLSVDEGLVLSAILTAGRTYDSELLGAAWAVLIRSLRKKKAPNPESYLGKIHALASLGNLQKAFGTLNEYESAYGDAGQEAEELFCPFTSLHPLVVACSKKGFETLDNVYFQLENLNRGENPYKSVAALNCVILGCANVWDLDRAYQTFESIGSTFGLTPDIHSYNGLMYAFGKLKKTHEASRVFEHLVSLGLKPNAKSYSLLVDAHLINRDVKSALAVINDMTAAGFEPSKETLKKVRRRCLREMDYESDDRVESLARSLNYRLGSEGRRDMLFNLDYSMEYP* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1413 605 MobiDBLite consensus disorder prediction 34 65 - -
Apr7g1413 605 TIGRFAM PPR: pentatricopeptide repeat domain 484 518 IPR002885 -
Apr7g1413 605 TIGRFAM PPR: pentatricopeptide repeat domain 520 552 IPR002885 -
Apr7g1413 605 Pfam PPR repeat family 481 527 IPR002885 -
Apr7g1413 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 482 516 IPR002885 -
Apr7g1413 605 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 517 551 IPR002885 -
Apr7g1413 605 Gene3D Tetratricopeptide repeat domain 103 301 IPR011990 GO:0005515
Apr7g1413 605 Gene3D Tetratricopeptide repeat domain 329 590 IPR011990 GO:0005515
Apr7g1413 605 PANTHER OS07G0599000 PROTEIN 1 604 IPR044605 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1413 479 571 Glycosyltransferase AT1G05670 25.806 5.01e-06 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1413 - - gmx:100800731 1009.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1413 7 21245503 21250235 Apr7g1413 7 21245503 21250235 ECH