Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1411 ATGCTTCTTTCTCCGTCCCTCGGTTCCGTCAAACCCAAGCCATTCCAGGTTGTCGCCGAGGCTTTCCCTTCCTTTCTTCCCAGGGAAGTTCACACTATTCGAGACCCCTCTGCTCGAAAACTTGCCATGCGGATTCAGAGGATACCCGTCCCTGTTAGGTTCTCAGAAAATCCCATCATGAGTAGTTGTGTGAAGCCACTGGTGCAGAGAAAGGAAACCCCAGTTGTTCTTCTACATGGTTTTGACAGCTCATGTTTAGAATGGAGATATGTATTACCATTGCTTGAGGAATCTGGTTTTGAGACCTGGGCCATTGACATTCTTGGTTGGGGTTTCTCTGATTTAGAAAAACTTCCTCCCTGTGATATGGTATCAAAGCGTGATCACTTCTATCAGTTTTGGAAGTCCTACATCAGAAGGCCAATGATATTGATTGGACCAAGCCTTGGCTCTGCTGTTGCAATTGACTTTGCGGTCAATTATCCTGAAGCTGTGGAAAAACTAGTTCTGATCGGTGCCAGTGTATATGCAGAGGGAACTGGAAAGCTAGCAACCTTGCCTAGAGCGATAGCCTATGCTGGGGTATATCTATTGAAGAGCATTCCATTACGCTTATATGCTACCCATTTGACCTTCACTAACATTTCCTTCAGCACCAGCATTGATTGGACTAATGTGGGCCGCTTGCATTGTTTATTGCCTTGGTGGGATGATGCTACTGTGGATTTTATGACTAGTGGTGGTTACAATGTTGCCTCCCTAATAGGAAAGGTAAAGCAAAAAACACTGATAGTATGGGGTGAAAATGACCGCATCATCAGCAATAAGTTTGCAGTGCAACTACACTGTGAATTACCTGATGCAATTATTCGCCAAATACCCAATTGTGGGCATCTCCCTCATTTGGAAAGACCAGATTCTACTATCAAATTAATTGTTGAATTTGTGCAGAAAGAGGCTAAGAAATTAAATCAATCTGTTTTACATGTATGA 993 0.434 MLLSPSLGSVKPKPFQVVAEAFPSFLPREVHTIRDPSARKLAMRIQRIPVPVRFSENPIMSSCVKPLVQRKETPVVLLHGFDSSCLEWRYVLPLLEESGFETWAIDILGWGFSDLEKLPPCDMVSKRDHFYQFWKSYIRRPMILIGPSLGSAVAIDFAVNYPEAVEKLVLIGASVYAEGTGKLATLPRAIAYAGVYLLKSIPLRLYATHLTFTNISFSTSIDWTNVGRLHCLLPWWDDATVDFMTSGGYNVASLIGKVKQKTLIVWGENDRIISNKFAVQLHCELPDAIIRQIPNCGHLPHLERPDSTIKLIVEFVQKEAKKLNQSVLHV* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1411 330 Gene3D alpha/beta hydrolase 66 327 IPR029058 -
Apr7g1411 330 PRINTS Alpha/beta hydrolase fold signature 99 114 IPR000073 -
Apr7g1411 330 PRINTS Alpha/beta hydrolase fold signature 144 157 IPR000073 -
Apr7g1411 330 PRINTS Alpha/beta hydrolase fold signature 158 171 IPR000073 -
Apr7g1411 330 PRINTS Alpha/beta hydrolase fold signature 262 276 IPR000073 -
Apr7g1411 330 PRINTS Epoxide hydrolase signature 79 97 IPR000639 GO:0003824
Apr7g1411 330 PRINTS Epoxide hydrolase signature 99 114 IPR000639 GO:0003824
Apr7g1411 330 PRINTS Epoxide hydrolase signature 158 171 IPR000639 GO:0003824
Apr7g1411 330 PRINTS Epoxide hydrolase signature 293 315 IPR000639 GO:0003824
Apr7g1411 330 PANTHER HYDROLASE 10 329 - -
Apr7g1411 330 SUPERFAMILY alpha/beta-Hydrolases 73 318 IPR029058 -
Apr7g1411 330 Pfam alpha/beta hydrolase fold 74 305 IPR000073 -
Apr7g1411 330 PANTHER ALPHA/BETA FOLD HYDROLASE 10 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1411 Apr-Chr7 21229938 21236542 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1411 71 326 Miscellaneous Gene Families AT1G52750 25.088 4.34e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1411 - - gmx:100800197 584.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1411 7 21229938 21236542 Apr7g1411 7 21229938 21236542 ECH
Apr3g1523 3 30023918 30040564 Apr7g1411 7 21229938 21236542 PCT