Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1406 ATGGGAACACTGACACCATCATCATCATCAATGTCCAATAAAACCATAACATTAGAAGAATGGAACGGTTCATCACCCACAAAGCTCTCAAAGACCTTCACCATCAAGGCTTCTTCTTCCTCTGTCTCCGTTACAAGATCTGGTGCCCGCTTTACCCATGTTTGGAAACGGTTACTTCAAGCATTTGTACCTGAGGGTTTTCCAAGCAGTGTGACTGCAGATTATGTTCCTTTTCAAATATGGGATTCATTGCAGGGCCTTTCAACGTATATAAGGACCATGCTTTCTACCCAGGCTCTCTTGAGTGCGATTGGGGTTGGAGAGAAATCAGCTACGGTGATTGGTGCCACTTTTCAGTGGTTTTTGAGGGATCTAACTGGTATGCTTGGAGGAATCTTATTCACATTTTACCAGGGATCAAATCTTGATAGCAATGCAAAAATGTGGCGTTTGGTTGCAGATCTTATGAATGACCTTGGAATGCTAATGGACCTCATTTCTCCATTATTTCCATCGGCTTTTGTGTTTGTTGTTTGCTTAGGAAGCATATCAAGATCTTTCACTGGTGTTGCAAGTGGAGCTACTAGAGCAGCTTTGACTCAGCATTTTGCTCTTCAGGATAATGCTGCAGATATATCTGCAAAGGAAGGAAGTCAAGAAACTGTGGCCACAATGATTGGCATGGCATTGGGAATGCTTGTTGCACGCATTACCATCGGACACCCACTAGCCATTTGGTTTTCATTTTTATCTCTGACCCTGTTTCATATTTATGCAAACTACCAAGCTGTTCGATGCCTGGCATTGAACTCATTAAACCCTGCAAGGAGCTCTATTCTTCTGCAGCATTTCATGGAGACTGGCCTAGTTCTCTCCCTTGAACAGGTCTCTTCACTGGAGCATGTTTTACCAATACAGCTCATTTCATGGAGCTCAAAGGATGATAATTATCTGCATAAGAAAGTACGTTTAGGCATGAGGATTTCTTCATTTGATAGCATCGAAATTAAGGAGCACGTGGTTTCTGCAGCATCGTACTATACAAAAGCCAAGTACTTGCTTGTGGAAAGGAAGGGAATAATTGATGTTATTGTGCATAAAGATTCAAACGCTGCTGATGTGCTAAAGTCATTCATTCATGGTCTCGTCCTGGCAAAGAGTGTTAATAAAAGCAAATCTTTGCATTCAGATGGCCAAATGTGGATAGATAATCAATATGAAGTATTTATTCAGAAGCTTAAGTCATCAGGCTGGAAAACAGAACGGCTTCTATCACCTATAATATGGAGGGCATACTGGATCTATGAAACGGTGGAAGAAAAAATTGATTAG 1332 0.4137 MGTLTPSSSSMSNKTITLEEWNGSSPTKLSKTFTIKASSSSVSVTRSGARFTHVWKRLLQAFVPEGFPSSVTADYVPFQIWDSLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLISPLFPSAFVFVVCLGSISRSFTGVASGATRAALTQHFALQDNAADISAKEGSQETVATMIGMALGMLVARITIGHPLAIWFSFLSLTLFHIYANYQAVRCLALNSLNPARSSILLQHFMETGLVLSLEQVSSLEHVLPIQLISWSSKDDNYLHKKVRLGMRISSFDSIEIKEHVVSAASYYTKAKYLLVERKGIIDVIVHKDSNAADVLKSFIHGLVLAKSVNKSKSLHSDGQMWIDNQYEVFIQKLKSSGWKTERLLSPIIWRAYWIYETVEEKID* 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1406 443 PANTHER PROTEIN ROOT UVB SENSITIVE 3 10 443 - -
Apr7g1406 443 PANTHER RUS1 FAMILY PROTEIN C16ORF58 10 443 IPR006968 -
Apr7g1406 443 Pfam Vitamin B6 photo-protection and homoeostasis 53 288 IPR006968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1406 Apr-Chr7 21198713 21204009 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1406 - - pvu:PHAVU_003G042500g 773.852
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1406 7 21198713 21204009 Apr7g1406 7 21198713 21204009 ECH