Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1387 ATGTCAATACCAGAAATAGTGTATTGTATATTGGCTTTGGCTTTTTGTGCATTCTTTGTATTGCTGAAGTGGAATGAGGTAAGGTACAGTAGGAAAGGAATGCCACCAGGAACTATGGGTTGGCCTATTTTTGGTGAGACTGCAGGGTTTCTCAAACAAGGACCAGATTTCATGAAATGCAAGAGAGCAAGGTACGGAAATCTCCTCAAGTCTCATGCATTAGGCTCTCCTATTGTCATAAGCATGGATCCAGAGCTCAACAGATACATCCTCAAGAATGAAGCAAAAGGTCTAGTTCCTGGCTACCCTGTGTCCATGAGGAATATACTAGGGAAAAGCAACATTGCTGAAGTTCATGGGGCTCTTCATAAACGTATTAGAGGGTCAATATTATCATTCATTGGTCCAGCTGCAATTAGAGGCCATCTTTTGCCAGAAGTTGACAAGTTCATGACGTCTTTCCTTGACAATTGGGATGACAAAACCATTGATATACAGCAAAAGACCAAACAGATGGCATTTTTTGTGTCAATGAAATTGATTGTAGAAAATGAACCGAGCCCTTTCAATGAGGCCTTTAAAGCTACGTTTGACAACATAGTGTCAGGAACATTTTCCTTGCCTATTAACATTCCTGGCACGAATTACTTCCGAGGACTTCAGACAAGGAAAAAAGTAGTTGCAACATTGAAAGAGGTTATAGCCAAGAGAAGATCTTCTTTGTCTACTCATGCTGATATCCTTGATCAGCTTATGAGAAATGAAGATTCGAGATACAAACTTAATGATGAAGAAATAATTGATCAAATAATCACATTCTTATATTCTGGTTATGAAACTGTTTCAACTACTACAATGATGGCTGTCAAATATCTACATGATAATCCTAGAGTTCTTGAAGAAGTAAGGAAAGAGCATTTTGCAATCCAACAAAGTAAAAGACCAGAAGATGTAATAAGCTGGGATGATTATAAGCTTATGGTTTATACACGTGGGGTGATTTTTGAAACCTTGAGATTGGCTAACATTGTTAATGGGGTATTAAGGAAGGCCACCACAGATGTTGAACTGAATGGATTTACCATTCCTCAGGGATGGAGAGTTTATGTTTACACAAGAGAGACCAATTGTGATCCCTTCCTCTATCGAGACCCTTGCAAATTCAACCCTTCGAGATGGCTGGAGAAAGGCTTAGAATATCATAACCATAACATGTTATTTGGAGCAGGAGTTAGAATGTGTCCCGGAAAGGAACTGGGCATACTTATAATCTCTCTTTTCCTTCACTATTTTGTTACTACATACAGGTGGGAAGTAGAGAGAAACAAACTCCTCAAGTTTCCCAGAGTTGAAGCACCAAATGGATTATACATAAAGGTGTCAAAATACTAA 1392 0.3872 MSIPEIVYCILALAFCAFFVLLKWNEVRYSRKGMPPGTMGWPIFGETAGFLKQGPDFMKCKRARYGNLLKSHALGSPIVISMDPELNRYILKNEAKGLVPGYPVSMRNILGKSNIAEVHGALHKRIRGSILSFIGPAAIRGHLLPEVDKFMTSFLDNWDDKTIDIQQKTKQMAFFVSMKLIVENEPSPFNEAFKATFDNIVSGTFSLPINIPGTNYFRGLQTRKKVVATLKEVIAKRRSSLSTHADILDQLMRNEDSRYKLNDEEIIDQIITFLYSGYETVSTTTMMAVKYLHDNPRVLEEVRKEHFAIQQSKRPEDVISWDDYKLMVYTRGVIFETLRLANIVNGVLRKATTDVELNGFTIPQGWRVYVYTRETNCDPFLYRDPCKFNPSRWLEKGLEYHNHNMLFGAGVRMCPGKELGILIISLFLHYFVTTYRWEVERNKLLKFPRVEAPNGLYIKVSKY* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1387 463 PRINTS P450 superfamily signature 276 293 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1387 463 PRINTS P450 superfamily signature 332 343 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1387 463 PRINTS P450 superfamily signature 405 414 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1387 463 PRINTS P450 superfamily signature 414 425 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1387 463 PANTHER CYTOCHROME P450 26 10 459 - -
Apr7g1387 463 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 407 416 IPR017972 GO:0005506|GO:0016705
Apr7g1387 463 Gene3D Cytochrome P450 25 462 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1387 463 Pfam Cytochrome P450 35 442 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1387 463 PANTHER CYTOCHROME P450 85A-LIKE 10 459 - -
Apr7g1387 463 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1387 463 PRINTS E-class P450 group I signature 265 282 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1387 463 PRINTS E-class P450 group I signature 331 349 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1387 463 PRINTS E-class P450 group I signature 371 395 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1387 463 PRINTS E-class P450 group I signature 404 414 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1387 463 PRINTS E-class P450 group I signature 414 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1387 463 SUPERFAMILY Cytochrome P450 28 444 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1387 Apr-Chr7 21011352 21016506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1387 82 463 Cytochrome P450 AT5G38970 56.250 9.48e-158 450
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1387 K09590 - gmx:100818004 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1387 7 21011352 21016506 Apr7g1387 7 21011352 21016506 ECH