Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1385 ATGCTAAGCTCGAGGCAATCCTTCTACATTTCTTTCTCTTCTCCTTCTTCTTCATTGTTTTGTATCATTCTCCTCCAATTTACAATTTTTCATGGCCTAGTTTTCTCTGCTAACCATGAAGCTTCAATTCTCTTCTCATGGCTTCATAGTTCTACAGCATCACCACCCCCTTCATCATTCTCTAACTGGAACATTCTTGATACCAATCCATGCAACTGGACCTGCATAACATGCTCCTCATTAGGCTTTGTCACTGAAATCAACATACAATCCGCCCCTCTTGAGCTTCCTATACCTTCCAACCTCTCTTCATTTCACTTTCTTCAAAAGCTTGTCATTTCTGATGCCAATCTCACTGGAACCATCCCTTCAGAGATTGGTGATTGCTCTTCACTCACTGTTATCGATCTCAGCTCTAATAATCTTGTTGGGTCTATTCCTTCAAGCATTGGCATGCTTCAGAATCTTGTGAACTTGTCTTTGAACTCCAACCAGCTTAGTGGGAAAATCCCAGTTCAGTTAAGCAATTGCATTGGCCTAAAAAATCTTCTCCTTTTTGATAATCAGTTAGGTGGGACTATTCCACCTGAGTTTGGAAAGTTGTCAAAACTTGAGGCCTTAAGAGCTGGAGGGAACAAAGATATAGTTGGGAAGATTCCTGAAGAGCTTGGAGAGTGCAGCAATTTGACAGTGTTGGGCCTGGCTGATACAAGAATATCTGGTTCTTTGCCTGCTTCTTTGGGTAGGCTTAGAAAGCTTCAAACTTTGTCCATCTATACTACCATGCTATCTGGTGAAATTCCACCTGAGTTGGGTAACTGTTCTGAGCTTGTTGACTTGTTCCTATATGAAAATAGCCTATCAGGGTCTATTCCATCTGAGGTTGGTAAGCTTCAGAAGCTGGAACAGTTGTTTTTGTGGCAGAATGGTCTTGTAGGGGCTATTCCAGAAGAGATTGGTAACTGCACAAGCTTGAGAAAACTTGATCTTTCTTTGAATTCTCTATCTGGAACTATACCTTTGTCTTTAGGGGGTCTTGTAGAGCTTGAAGAGTTTATGATTAGTGATAATAATGTGTCTGGTTCAATCCCTTCTAGTCTTTCAAATGCTAGAAATCTTCAACAGTTGCAAGTTGACACAAATCAGCTCTCAGGCTTGATTCCGCCAGAGCTTGGACAGTTGTCAAATCTCATAGTATTCTTTGCTTGGCAGAACCAGCTTGAAGGAAGCATTCCTTCAACTTTGGGGAACTGTAGTAACCTTCAAGCACTGGACTTGTCTAGAAATGCACTCACCGGTAGCATTCCTGTTGGCCTATTCCTGCTCCAAAACCTCACAAAACTGCTGCTGATTTCCAATGACATATCAGGCTTCATACCAAATGAAATAGGTAGTTGCAGCTCTCTTATAAGGTTGAGGCTTGGAAACAATAGGATTACCGGTAGCATACCCAAGACAATGGGTAACCTCAAGAGCTTGAATTTCTTAGATCTCTCTGGCAACCGCCTCTCTGGACCGGTGCCTGATGAGATTGGAAGCTGCTCAGAATTGCAAATGATAGACTTCAGCAGCAACAGCTTAGACGGTCCACTGCCTAATTCTTTGTCATCACTATCTGCAGTTCAGGTATTGGATGCATCTTCTAACAAGTTTTCAGGCCCTATACTGGCAAGCTTGGGCCGTCTTGTTTCTCTGAATAAGCTTATCCTAAGCAATAACTTGTTTTCTGGTCCAATTCCTGCCTCACTGAGCCTATGTTCAAATCTTCAACTGCTTGATCTTAGTAGCAACAAGCTCATTGGAAGCATACCAGCCGAGCTCAGCCGTATTGAGACTCTAGAAATTGCTCTTAATCTTAGTTGCAATGCACTCAGTGGAACAATACCAGCTCAGATATCTTTCCTTAACAAGCTTTCTATACTGGACCTTTCACATAACCAGTTGGAAGGAGATTTGCAACCTCTTGCAGGTTTAGATAACCTTGTTTCCCTCAATGTTTCTTACAACAAATTTTATGGATATCTTCCAGATAACAAGCTTTTCAGGCAGTTGTCATCAAAAGACCTCACTGGAAATGAAGGGCTTTGCACTTCAGGTCAGGACTCATGCTTTGTGAAGGATTTTGGCAAGACTAGCATGGTATTGAATGGAAATGATGCAAGGAAATCACGAAAGCTTAAGCTAGCCATTGGATTGCTAATAGCCTTAACAGTGATAATGATTGTTATGGGGATAACTGCTGTGATCAGAGCAAGAAGAACCATTAGAGATGATGATTCAGAATTAGGGGACTCGTGGCCATGGCAATTCATACCATTCCAGAAACTAAACTTTTCGGTTGAACAAGTGCTGAGGTGTTTGGTCGATAGAAATATAATCGGCAAGGGATGTTCTGGTGTTGTTTATCGAGCTGAAATGGATAATGGTGAAGTCATTGCTGTGAAGAAATTATGGCCAACAACAATTGATGCAGGAGAGGCATTTAAGGAAGAAAAGAGTGGAGTTCGTGACTCATTCTCAACTGAGGTTAAGACCCTTGGCTCCATCCGTCATAAGAACATTGTCAGATTCTTGGGCTGTTGTTGGAACAGAAAAACAAGATTGCTTATTTTTGATTATATGCCAAATGGAAGTTTGAGTAGTCTACTTCATGAGAGGACTGGAAATTCTCTGGAATGGGAACTTAGGTACCGCATCTTGCTAGGCGCTGCGGAGGGCATTGCATATCTACATCATGATTGTGTACCTCCTATTGTCCACAGAGATATTAAAGCCAATAACATCCTCATTGGCCTTGAGTTTGAACCTTACATTGCTGACTTTGGCTTGGCTAAACTAGTTGATGATGGTGATTTTGGTCGTTCTTCAAATACAGTAGCTGGTTCCTATGGATATATTGCTCCAGAATATGGCTATATGATGAAGATCACAGAGAAGAGCGACGTTTATAGCTACGGCATAGTTTTGTTAGAAGTTTTGACAGGTAAGCAACCAATTGATCCAACCATTCCAGATGGTCTACATGTTGTTGATTGGGTGAGACAGAAAAGAGGTCTTGAAGTACTTGATCCTAGTTTACTCTCTAGACCGGAGTCAGAGATAGAGGAAATGATCCAAGCATTGGGAATAGCCTTATTGTGTGTAAATTCATCCCCTGATGAAAGGCCAACAATGAGAGATATTGCTGCAATGCTTAAGGAGATAAAGCATGAAAGGGAGGAATATGCAAAATTTGATGTGCTTCTAAAAGGGTCTCCTGCAAATGGTGCATGTGTGAATAAAAGCATTGGTGGAGTTCTGCCAACATCCTCTTCTTCAATACCAGTCATGCAAACTTCGAAAACAAAAAGCAATAACTCAAGCTTCTCTGTGTCTTCACTGCTTCATTCATCTTCAAGTGTCAAGTTGGGTTCCAAATGA 3420 0.4143 MLSSRQSFYISFSSPSSSLFCIILLQFTIFHGLVFSANHEASILFSWLHSSTASPPPSSFSNWNILDTNPCNWTCITCSSLGFVTEINIQSAPLELPIPSNLSSFHFLQKLVISDANLTGTIPSEIGDCSSLTVIDLSSNNLVGSIPSSIGMLQNLVNLSLNSNQLSGKIPVQLSNCIGLKNLLLFDNQLGGTIPPEFGKLSKLEALRAGGNKDIVGKIPEELGECSNLTVLGLADTRISGSLPASLGRLRKLQTLSIYTTMLSGEIPPELGNCSELVDLFLYENSLSGSIPSEVGKLQKLEQLFLWQNGLVGAIPEEIGNCTSLRKLDLSLNSLSGTIPLSLGGLVELEEFMISDNNVSGSIPSSLSNARNLQQLQVDTNQLSGLIPPELGQLSNLIVFFAWQNQLEGSIPSTLGNCSNLQALDLSRNALTGSIPVGLFLLQNLTKLLLISNDISGFIPNEIGSCSSLIRLRLGNNRITGSIPKTMGNLKSLNFLDLSGNRLSGPVPDEIGSCSELQMIDFSSNSLDGPLPNSLSSLSAVQVLDASSNKFSGPILASLGRLVSLNKLILSNNLFSGPIPASLSLCSNLQLLDLSSNKLIGSIPAELSRIETLEIALNLSCNALSGTIPAQISFLNKLSILDLSHNQLEGDLQPLAGLDNLVSLNVSYNKFYGYLPDNKLFRQLSSKDLTGNEGLCTSGQDSCFVKDFGKTSMVLNGNDARKSRKLKLAIGLLIALTVIMIVMGITAVIRARRTIRDDDSELGDSWPWQFIPFQKLNFSVEQVLRCLVDRNIIGKGCSGVVYRAEMDNGEVIAVKKLWPTTIDAGEAFKEEKSGVRDSFSTEVKTLGSIRHKNIVRFLGCCWNRKTRLLIFDYMPNGSLSSLLHERTGNSLEWELRYRILLGAAEGIAYLHHDCVPPIVHRDIKANNILIGLEFEPYIADFGLAKLVDDGDFGRSSNTVAGSYGYIAPEYGYMMKITEKSDVYSYGIVLLEVLTGKQPIDPTIPDGLHVVDWVRQKRGLEVLDPSLLSRPESEIEEMIQALGIALLCVNSSPDERPTMRDIAAMLKEIKHEREEYAKFDVLLKGSPANGACVNKSIGGVLPTSSSSIPVMQTSKTKSNNSSFSVSSLLHSSSSVKLGSK* 1140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1385 1139 PANTHER RECEPTOR-LIKE PROTEIN KINASE 2 19 1132 - -
Apr7g1385 1139 Pfam Leucine rich repeat 444 503 IPR001611 GO:0005515
Apr7g1385 1139 Gene3D Ribonuclease Inhibitor 40 150 IPR032675 -
Apr7g1385 1139 SUPERFAMILY RNI-like 363 685 - -
Apr7g1385 1139 Gene3D Ribonuclease Inhibitor 322 440 IPR032675 -
Apr7g1385 1139 Gene3D Transferase(Phosphotransferase) domain 1 874 1083 - -
Apr7g1385 1139 ProSiteProfiles Protein kinase domain profile. 787 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1385 1139 ProSitePatterns Protein kinases ATP-binding region signature. 793 816 IPR017441 GO:0005524
Apr7g1385 1139 ProSitePatterns Serine/Threonine protein kinases active-site signature. 918 930 IPR008271 GO:0004672|GO:0006468
Apr7g1385 1139 Gene3D Ribonuclease Inhibitor 530 615 IPR032675 -
Apr7g1385 1139 Pfam Leucine rich repeat N-terminal domain 37 79 IPR013210 -
Apr7g1385 1139 MobiDBLite consensus disorder prediction 1110 1139 - -
Apr7g1385 1139 PRINTS Leucine-rich repeat signature 421 434 - -
Apr7g1385 1139 PRINTS Leucine-rich repeat signature 635 648 - -
Apr7g1385 1139 Gene3D Ribonuclease Inhibitor 246 321 IPR032675 -
Apr7g1385 1139 SUPERFAMILY Protein kinase-like (PK-like) 765 1066 IPR011009 -
Apr7g1385 1139 Gene3D Ribonuclease Inhibitor 151 245 IPR032675 -
Apr7g1385 1139 Gene3D Ribonuclease Inhibitor 441 529 IPR032675 -
Apr7g1385 1139 ProSiteProfiles Leucine-rich repeat profile. 637 659 IPR001611 GO:0005515
Apr7g1385 1139 ProSiteProfiles Leucine-rich repeat profile. 420 442 IPR001611 GO:0005515
Apr7g1385 1139 SUPERFAMILY RNI-like 111 504 - -
Apr7g1385 1139 SMART serkin_6 787 1069 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1385 1139 Pfam Protein tyrosine and serine/threonine kinase 791 1064 IPR001245 GO:0004672|GO:0006468
Apr7g1385 1139 Gene3D Phosphorylase Kinase; domain 1 773 873 - -
Apr7g1385 1139 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 19 1132 - -
Apr7g1385 1139 SMART LRR_typ_2 418 442 IPR003591 -
Apr7g1385 1139 SMART LRR_typ_2 346 370 IPR003591 -
Apr7g1385 1139 SMART LRR_typ_2 153 177 IPR003591 -
Apr7g1385 1139 SMART LRR_typ_2 298 322 IPR003591 -
Apr7g1385 1139 SMART LRR_typ_2 635 659 IPR003591 -
Apr7g1385 1139 SMART LRR_typ_2 490 514 IPR003591 -
Apr7g1385 1139 SMART LRR_typ_2 587 610 IPR003591 -
Apr7g1385 1139 SMART LRR_typ_2 562 586 IPR003591 -
Apr7g1385 1139 Gene3D Ribonuclease Inhibitor 616 707 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1385 Apr-Chr7 20984619 20989074 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1385 35 1084 Receptor kinase-like Gene Family AT5G56040 48.075 0.0 962
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr7g1385 PK_Tyr_Ser-Thr 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1385 - - gmx:100818541 1897.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1385 7 20984619 20989074 Apr7g1559 7 22677892 22679837 PCT