Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1381 ATGGAATCTTGGAGTTATGTCCCTGAAGAGAAAGGCTATTTGTTTTCTGATGAAATGGATTTTTCACTTGATGCTTTTATGAGAAGTAGGAAAGCATTGGTTGAATGGGACAATAAATCTAACTTTGAGAGAGATGGATTTAATTCAGACAGAGGTGTAGTGAAAAGCATGGAATTTGTGGACTTGGGATTCCCTGACTTGTTGCAAAAGTCTTTTCACGGTGGCCAGCCTGTAGAGACATCTAGCTATGAACTTGACAGTAATTCTAGTAAAAGAGGGAATTCTTCCACCCATGTCATTGCTTTGGATTCTTCTTTGGGGGAAGAAGAATCTGAGTCAAAGCGTGTAAGTTCTCGAGTTGAATCCAAAACTCATGATTCTTCACTGATTGATCTGAAGCTAGGGAGATTAGTGGACTGTAAAGGGGCAAGCAGTGATAAAGTTGCAAAAGAAGGGTTCACTTTAACATCTATACATCCAAACACACTTGCAAAGAGAGCTCGCACGTCCACCTTACCTGCTCAGGCTCCTGTATGTCAAGTTTATGGTTGTAACATGGATCTTAGCTCCTCAAAAGATTACCACAAGAGGCATAAGGTTTGTGATGTTCACTCCAAAACGGCTAAAGTTATTGTTAATGGCATTGAACAGAGGTTTTGTCAGCAATGCAGCAGGTTCCATTTGCTAGCTGAGTTTGATGACGGTAAACGCAGTTGTCGCAGGCGACTAGCAGGACACAATGAACGCCGTAGGAAACCTCAGTTTGATTACATAAGTGGTAAACAACACAAGATTCTTCAGTCATATCAAGGTACTAAGTATCTAGGCTCTTCAATACAGAACAGACCCCAATTTGCCTTTCAAGACATATTTCAAAGTGGAATCCTTTTAGGAAAGCATGATCAGATCTCTCAGAGCGGACGTATCAAACTGGAAGATGATTCAATTTATGGTCCTCAACTTGCTGCACCCATCACACTTAGTCAGGAATTATCTAGCTGTGCTCTCTCTCTTCTGTCAGATCAGTCACAGAATCCATCACACCATGCAGCAGGAAATCCATTAGCCAGTTGCCGAATTCCTCATGGCATCTGCGTATCCAACAGAGATGACCAAGTTTCTCAAACACCTTTGAGGATAAACTCGGTGGATAAATATGTACCGAGCGAGTCCTTCCCATATACTATACCCTCTAAGGAAGTTATCAAGAATAGATCCACAACATTTTCCAATGCTGCTGATCATACTCTTCAAGTCCACAGAGATGATGATGTTTGCCAAGCATCAGACTTGTTAGATGGCAGGTATCGTCTTTCATCTGAACATGGAGGGACTGTTGATCTGTTCCAACTATCTTCTCATCTCCAAAGGGTGGAGCAGCAAAGAAATTCTGTTTTGGTAAAGTGGGAAAATGAGGAGTGTTGTTTTCCAACTGTGTAA 1440 0.4153 MESWSYVPEEKGYLFSDEMDFSLDAFMRSRKALVEWDNKSNFERDGFNSDRGVVKSMEFVDLGFPDLLQKSFHGGQPVETSSYELDSNSSKRGNSSTHVIALDSSLGEEESESKRVSSRVESKTHDSSLIDLKLGRLVDCKGASSDKVAKEGFTLTSIHPNTLAKRARTSTLPAQAPVCQVYGCNMDLSSSKDYHKRHKVCDVHSKTAKVIVNGIEQRFCQQCSRFHLLAEFDDGKRSCRRRLAGHNERRRKPQFDYISGKQHKILQSYQGTKYLGSSIQNRPQFAFQDIFQSGILLGKHDQISQSGRIKLEDDSIYGPQLAAPITLSQELSSCALSLLSDQSQNPSHHAAGNPLASCRIPHGICVSNRDDQVSQTPLRINSVDKYVPSESFPYTIPSKEVIKNRSTTFSNAADHTLQVHRDDDVCQASDLLDGRYRLSSEHGGTVDLFQLSSHLQRVEQQRNSVLVKWENEECCFPTV* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1381 479 Pfam SBP domain 179 252 IPR004333 GO:0003677
Apr7g1381 479 SUPERFAMILY SBT domain 177 258 IPR036893 GO:0003677|GO:0005634
Apr7g1381 479 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 42 477 - -
Apr7g1381 479 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 42 477 IPR044817 GO:0003677
Apr7g1381 479 ProSiteProfiles Zinc finger SBP-type profile. 176 253 IPR004333 GO:0003677
Apr7g1381 479 Gene3D - 170 240 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1381 Apr-Chr7 20926816 20932653 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1381 93 477 SBP-box Gene Family AT1G69170 37.468 2.05e-63 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Apr7g1381 SBP 1.1e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1381 - - gmx:100797372 776.933
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1381 7 20926816 20932653 Apr7g1381 7 20926816 20932653 ECH