Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1377 ATGGGTAGCCTTTGTTCATGTTTCAAGAGAAAGAATCCTGAGGAAGAAACTGTTCAACTTTCGGAGATTGCCAATGAAAATCTTACCTTTGCCATTTCTAACACATCAAATAAGGCTGAAAATTCTCCAGTAGCTGTGGCCAGTGGTGAAGCTGAATCATCAAATTCCAATATAAATCGTTTGGATTCAGGCACTTCTAAAACCTCGCAAGACAACGTCTGTCCGACATGTTTCGAAGAATATAGTGACCAAAATCCTAAGATTGTAACAAAGTGCAATCACCATTACCACCTTAGCTGTATATGTGACTGGAGGAAGAGAAGTAGAACTTGTCCAGCTTGTAGACAGGAGTTGGTTTTTGATGGAACGAAATAA 375 0.3947 MGSLCSCFKRKNPEEETVQLSEIANENLTFAISNTSNKAENSPVAVASGEAESSNSNINRLDSGTSKTSQDNVCPTCFEEYSDQNPKIVTKCNHHYHLSCICDWRKRSRTCPACRQELVFDGTK* 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1377 124 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 50 121 IPR013083 -
Apr7g1377 124 ProSiteProfiles Zinc finger RING-type profile. 74 115 IPR001841 -
Apr7g1377 124 Pfam RING-H2 zinc finger domain 66 115 IPR024766 GO:0008270
Apr7g1377 124 MobiDBLite consensus disorder prediction 38 71 - -
Apr7g1377 124 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 24 123 - -
Apr7g1377 124 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 24 123 - -
Apr7g1377 124 SUPERFAMILY RING/U-box 68 121 - -
Apr7g1377 124 SMART ring_2 74 114 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1377 Apr-Chr7 20861708 20863451 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1377 74 123 C3H Transcription Factor Family AT5G41350 60.000 8.46e-21 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1377 - - aprc:113870372 262.692