Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1365 ATGAAAGCAGCGAAAGGGAACCAGGAAGAGGAAGAGTACGAGGAGGAAGACTTCGGTTCTTCTAAGAAACAGGGTCCTTCTTCTGCGCCTAATACCAACAAAGATGCAAAAGCTATTGACAAGGCTAGTGCAATAAGATCGAAACATTCTGTGACTGAGCAGCGAAGAAGGAGCAAGATAAATGAGAGATTCCAGATATTGAGGGATCTCATACCTCATAGTGATCAAAAGAGGGACACGGCATCATTTTTATTAGAGGTGATTGAGTATGTTCAATACTTACAGGAGAAGGTGCAAAAATATGAAGGCTCATATCAAGGTTGGGGTCAAGAGCCCTCGAAGTTGATGCCATGGAGAAATAGTCATTGGCGTGTCCAAAGCTTTGTTGGTCAACCTCCAGCTATAAAGAATGGTTCAGGTCCAGTTTCACCTTTTCCTGGAAAGTTTGAGGAAAGCAATGTTAGTATCACTCCAACCATGCTTGGTGGCACTCAGAATACAATAGATCCTGATCAGAGCAGGGATATTGTCAACAAAACAGCAGAGAGACAACCTGATTTAGCAAGCAAAGGAATATCTCTGCCCTTGGCTATGCTTTCAAATATGTCTGTTCCTGTCAGAAGTGATGGTGCACTTGCACATCCTCTTCAAGGAACTGTTTCTGATGCACAATCAACTGAATGCCCAACAACTAGTGAACCACAGAACCCGCAGGACGAACTCACAGTTGAAGGAGGGACAATTAGCATCTCAAGTGTTTACTCCCAAGGGTTGTTGAATAATTTATCTCAAGCATTACAAAGTGCTGGTTTAGATCTGTCACAGGCTAGTATATCAGTTCAGATTAATCTAGGGAAACGGGCAAACAAAGGACCAAGTTGTGGGACCTCTTCTCCCAAGAATCATGATAACCTTCCTTCAAGCAATCAAACCATTGCACATTTTAGAGATGCATGCAGTGAAGACTCAGATCAAGCACAAAAGCGAATGAAAACATACAAGTGA 1005 0.4259 MKAAKGNQEEEEYEEEDFGSSKKQGPSSAPNTNKDAKAIDKASAIRSKHSVTEQRRRSKINERFQILRDLIPHSDQKRDTASFLLEVIEYVQYLQEKVQKYEGSYQGWGQEPSKLMPWRNSHWRVQSFVGQPPAIKNGSGPVSPFPGKFEESNVSITPTMLGGTQNTIDPDQSRDIVNKTAERQPDLASKGISLPLAMLSNMSVPVRSDGALAHPLQGTVSDAQSTECPTTSEPQNPQDELTVEGGTISISSVYSQGLLNNLSQALQSAGLDLSQASISVQINLGKRANKGPSCGTSSPKNHDNLPSSNQTIAHFRDACSEDSDQAQKRMKTYK* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1365 334 Gene3D - 42 115 IPR036638 GO:0046983
Apr7g1365 334 MobiDBLite consensus disorder prediction 287 334 - -
Apr7g1365 334 CDD bHLH_AtBIM_like 43 119 - -
Apr7g1365 334 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 42 116 IPR036638 GO:0046983
Apr7g1365 334 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 44 94 IPR011598 GO:0046983
Apr7g1365 334 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 1 332 IPR044295 GO:0003700|GO:0006351|GO:0046983
Apr7g1365 334 MobiDBLite consensus disorder prediction 287 316 - -
Apr7g1365 334 Pfam Helix-loop-helix DNA-binding domain 46 95 IPR011598 GO:0046983
Apr7g1365 334 MobiDBLite consensus disorder prediction 219 240 - -
Apr7g1365 334 MobiDBLite consensus disorder prediction 317 334 - -
Apr7g1365 334 MobiDBLite consensus disorder prediction 39 58 - -
Apr7g1365 334 MobiDBLite consensus disorder prediction 1 58 - -
Apr7g1365 334 PANTHER TRANSCRIPTION FACTOR BIM2 1 332 - -
Apr7g1365 334 SMART finulus 50 100 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1365 Apr-Chr7 20738132 20743398 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1365 1 301 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G69010 59.406 1.44e-117 340
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Apr7g1365 HLH 1.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1365 - - gmx:100816055 579.711