Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1360 ATGGCTTCAAAAACTATAATCTTTACCATTGAGGTTGCTTGTGCAATAGCATTTTTTACATCCCATGTTGTTTTATCTGATGACACAGTGCCAATTCCAGCTGAAAAGGCCCAACTAAACACATGGTTCACTAACAATGTGAAGCCTTTAAAAGAAAGAAAAGCCACCCTAGACCCTGCTTTGTTGACTGCAGAAGAAGGTAGCAAGGTTGTGAAGGTAATGCAAGATGGTAGTGGGGATTTCAAGACCATTACCGATGCCATTAACAGCATACCTAATGAAAACACCAAGCGTGTGATTGTGTACATTGGAGCTGGAAATTATAATGAAAAAATTAAAATTGAGAGGACAAAGCCTTTTGTCACCTTATATGGGGTACCAGAGCACATGCCAAACTTAACCTTTGGGGGAACTGCACAAAAATATGGCACAGTTGATAGTGCTACATTGATTGTTGAATCAGATTATTTTGTTGCAGCTAATATCATGATCTCGAATTCTGCTCCAAGGCCTGATGGAAAACGACCAGGAGCTCAAGCTGTTGCGTTGAGAATTTCTGGAGACAAAGCAACGTTTTATAATTGCAAGTTGTTGGGATTCCAAGACACTGTTTGTGATGATCGGAATAAGCATTTTTTCAAAGATTGCTTAATTCAAGGAACTGTGGATTTTATTTTTGGCAGTGGGAAATCACTATATTTGAACACTGAATTAAGAGTACTTGGTGATAGCGGGATGACAGTAATAGTAGCACAGGCAAGAAAAAGTGAGGAAGAGGACTATGTCTACTCTTTTGTCCATTGTGACATTACTGGAACTGGAACTGGCACTTACTTGGGCAGAGCATGGATGTCTCATCCAAAAGTTATCTTTGCTTATACCAGCATGAGCAGTGTTATTATTCCAGAAGGATGGGGAGACAATAGACACCCTGAATATGCCAAAACTGCACAATTTGGAGAGTATCAGAACAAGGGACCTGGTGCTGATCCCAAAGGTCGAGCCAGTTTCACAAAACAACTAACTGCTGAGCAGGTCAAACCATTTATATCTCTTGCCATGATTGAAGGCTCCAAATGGCTACTTCCTCCTCCACATCCTGCGGTCTAA 1110 0.4072 MASKTIIFTIEVACAIAFFTSHVVLSDDTVPIPAEKAQLNTWFTNNVKPLKERKATLDPALLTAEEGSKVVKVMQDGSGDFKTITDAINSIPNENTKRVIVYIGAGNYNEKIKIERTKPFVTLYGVPEHMPNLTFGGTAQKYGTVDSATLIVESDYFVAANIMISNSAPRPDGKRPGAQAVALRISGDKATFYNCKLLGFQDTVCDDRNKHFFKDCLIQGTVDFIFGSGKSLYLNTELRVLGDSGMTVIVAQARKSEEEDYVYSFVHCDITGTGTGTYLGRAWMSHPKVIFAYTSMSSVIIPEGWGDNRHPEYAKTAQFGEYQNKGPGADPKGRASFTKQLTAEQVKPFISLAMIEGSKWLLPPPHPAV* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1360 369 PANTHER PECTINESTERASE 63-RELATED 36 362 - -
Apr7g1360 369 Gene3D - 65 364 IPR012334 -
Apr7g1360 369 Pfam Pectinesterase 71 357 IPR000070 GO:0030599|GO:0042545
Apr7g1360 369 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 36 362 - -
Apr7g1360 369 SUPERFAMILY Pectin lyase-like 69 363 IPR011050 -
Apr7g1360 369 ProSitePatterns Pectinesterase signature 2. 218 227 IPR033131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1360 Apr-Chr7 20690698 20692355 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1360 16 365 Carbohydrate Esterase AT1G69940 56.286 6.92e-147 418
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1360 K01051 - gmx:100306177 611.298