Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1358 ATGGGAAGATCTCCATGCTGTGATGAGATTGGTTTGAAGAAAGGTCCTTGGACACCTGAAGAAGATGAGAAGCTTGTTAACCACATTCAAAAATATGGTCATGCAAGCTGGAGGGCTCTTCCAAAACTAGCAGGACTCAACAGGTGTGGCAAAAGTTGCAGGTTAAGGTGGACGAACTACTTGAGGCCTGACATTAAGAGAGGGAAGTTTTCTCAAGAAGAAGAACAAACAATTCTGAATCTCCATGCCATCCTTGGAAACAAATGGTCAACAATTGCAAGTCACTTACCAGGTCGGACAGATAATGAAATCAAGAATTTTTGGAACACCCATCTCAAAAAGAAGCTTATTCAAATGGGTTATGATCCAATGACACACCAACCTCGAACTGATGATATCTTCTCAGGCTTGTCTCATCTCATAGCACTGGCAAATCTGAAAGAATTCTTAGACCATCATCATCATTATTCATGGGAACAAAACGTTGCAAGGCTACAAGCGGAGACCATCCAATTGACCGGGCTCCAATGCTTCCAACAGCAACACCTCTTTCAGCCACAAGCTTCAACTGAGTTTGAGCCTAACACCAATAACCTTTCAAAAGATCATTTTGAAAACACCATGCCATTATCTACTGGAATTGGTAGCAATCTCCATTTGGTCAATGATTCCATCCCTTTCTCTCACATGCCAAGCTTGGAAACACCCCCTTGTTGTTCATATGAAGCACCATTAAGCAAGGAAATGTTCCAAGCCCCTAACGAATCCACTACTGCATTTTGTCAAGGAGAAAGTTATCCCAATTCTCCATGGCTTCTTTCATGCTCAAGCACTACCCCTTCTCCCTCCCATGCTGTTCCACCTGTGACACAGGTTTCATTAACTAGTATGGAAGATAATTGCATTAATTCTGCTATTTGGTCTGAGCTCTTGCTAGAGGACCCTTTGTTCAACAGGATTTCCTAG 966 0.4244 MGRSPCCDEIGLKKGPWTPEEDEKLVNHIQKYGHASWRALPKLAGLNRCGKSCRLRWTNYLRPDIKRGKFSQEEEQTILNLHAILGNKWSTIASHLPGRTDNEIKNFWNTHLKKKLIQMGYDPMTHQPRTDDIFSGLSHLIALANLKEFLDHHHHYSWEQNVARLQAETIQLTGLQCFQQQHLFQPQASTEFEPNTNNLSKDHFENTMPLSTGIGSNLHLVNDSIPFSHMPSLETPPCCSYEAPLSKEMFQAPNESTTAFCQGESYPNSPWLLSCSSTTPSPSHAVPPVTQVSLTSMEDNCINSAIWSELLLEDPLFNRIS* 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1358 321 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 307 - -
Apr7g1358 321 CDD SANT 69 112 IPR001005 -
Apr7g1358 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Apr7g1358 321 CDD SANT 16 61 IPR001005 -
Apr7g1358 321 PANTHER TRANSCRIPTION FACTOR MYB39-LIKE 1 307 - -
Apr7g1358 321 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Apr7g1358 321 Gene3D - 11 67 - -
Apr7g1358 321 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Apr7g1358 321 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Apr7g1358 321 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Apr7g1358 321 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Apr7g1358 321 Gene3D - 69 116 - -
Apr7g1358 321 SMART sant 66 114 IPR001005 -
Apr7g1358 321 SMART sant 13 63 IPR001005 -
Apr7g1358 321 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1358 Apr-Chr7 20667307 20668693 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1358 1 320 MYB Transcription Factor Family AT5G10280 49.288 6.55e-101 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Apr7g1358 Myb_DNA-binding 7.5e-16 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1358 K09422 - gmx:100785374 441.81