Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1344 ATGGTTCCTAGTGAGATCAGAGGAGTCCAATACCTGGCACCTGAAAACCCATTCCTAGTTCCACCCAACTTTGCCTTGCTTCAAAGTGAAATCCCAAACCTCCAGCTCAACACCCTCTTAAGCACCATCCCAAACTCCCACTTCCCACCATTAGGCCATGAATTTGTAGCTCCTCCCTCTTCATGCCTCAGCAGCAACTCAACTTCCGATGAAGCTGATGAAATTCAGTTCAATATCATAGATGAGAGGAAACACAGAAGAATGATATCCAACAGAGAATCAGCCAGAAGATCAAGGATGAGGAAACAAAAGCACTTGGATGAACTTTGGTCACAGGTTGTTAGGCTCAGAAATGAGAACCACAACCTTATTGACAAACTCAACCATGTTTCTGAATCCCATGACAAAGTCCTCCAAGAAAATGCACGCCTCAAGGAAGAAGCTTCTGATCTTCGCCAAATGCTAGCAGACATGCATATTGGAACCTCTTTTGCTTGCACCATGGAAGATTTGGAGGACCTTCCTTGCAACACTTCTCAACTCAAACCTCTTCCCTCAGCCTCAAACCAATCAATCACCCCTGATGACTTGATTCATGAATGA 603 0.4461 MVPSEIRGVQYLAPENPFLVPPNFALLQSEIPNLQLNTLLSTIPNSHFPPLGHEFVAPPSSCLSSNSTSDEADEIQFNIIDERKHRRMISNRESARRSRMRKQKHLDELWSQVVRLRNENHNLIDKLNHVSESHDKVLQENARLKEEASDLRQMLADMHIGTSFACTMEDLEDLPCNTSQLKPLPSASNQSITPDDLIHE* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1344 200 Coils Coil 127 154 - -
Apr7g1344 200 Gene3D - 81 136 - -
Apr7g1344 200 PANTHER BZIP PROTEIN (ATBZIP48) 1 190 - -
Apr7g1344 200 PANTHER BASIC LEUCINE ZIPPER 43-RELATED 1 190 IPR044521 -
Apr7g1344 200 MobiDBLite consensus disorder prediction 177 200 - -
Apr7g1344 200 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 81 144 IPR004827 GO:0003700|GO:0006355
Apr7g1344 200 SMART brlzneu 79 143 IPR004827 GO:0003700|GO:0006355
Apr7g1344 200 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 86 101 IPR004827 GO:0003700|GO:0006355
Apr7g1344 200 Pfam bZIP transcription factor 83 141 IPR004827 GO:0003700|GO:0006355
Apr7g1344 200 MobiDBLite consensus disorder prediction 179 200 - -
Apr7g1344 200 CDD bZIP_plant_GBF1 84 135 IPR045314 GO:0003700|GO:0006355
Apr7g1344 200 SUPERFAMILY Leucine zipper domain 83 133 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1344 Apr-Chr7 20511825 20512467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1344 23 171 bZIP Transcription Factor Family AT3G30530 57.962 3.14e-50 159
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr7g1344 bZIP_1 2.1e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1344 - - gmx:778126 353.984