Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1339 ATGGCAAAAGATAATTCTGATTCCGATTCCCACAATAGACGTCTTGGTCTTTTAAAAGATCAAGTTAACTTGGTTAAAAGGAGAGACTCTAATCGCTATGAGATTGCTCCAATCCTTGACCAACTATCGTTTGAGAAGGGTTTTTTTATAGTAATTCGTGCATGCCAATTGTTAGCCCAAAAGAATGATGGAATAATATTGGTAGGGGTGGCCGGACCTTCAGGGGCAGGGAAGACTGTATTTACTGAAAAGATACTCAACTTCATACCCAGCGTTGCAGTCATTTCAATGGATAATTACAATGATGCTAGTCGAATTGTTGATGGAAACTTTGATGATCCACGCTTAACAGACTATGACACATTGCTCCAGAATCTACATGATTTGAAGGAAGGAAAGCCGGTTGAGGTTCCTATATATGATTTCAAGTCCAGTTCACGTACAGGATACAGGACAGTAGAATCCCCAAGTTCTCGTATAGTGATTATAGAAGGCATCTATGCCTTGAGTGAGAAGTTGCGACCTTTACTGGACCTTCGAGTCTCTGTCACGGGAGGAGTTCACCTTGACCTTGTAAAACGAGTTATACGTGACATACAGCGTGCTGGTCAAGAACCTGAAGAAATTATTCATCAAATATCTGAGACGGTGTATCCAATGTATAAGGCCTTTATTGAGCCAGATCTCCAGACAGCACATATAAAAATCATCAACAAATTTAATCCATTTACTGGATTCCAGAGCCCTACTTACATTCTAAAGTCAGCAAGGAATGTCACAGCGGATCAAATTAAAGCTGTTCTCTCTGAGGATTTTAAGGAAACAACAGAGCAAACTTATGACATATATCTTCTACCACCTGGTGAAGATCCAGAAACTTGCCAATCATATTTACGGATGCGAAATAAGGATGGGAAATATAGTCTCATGTTTGAGGAATGGGTGACAGACAATCCATTCGTCATATCACCAAGAATTACTTTTGAGGTCAGTGTGCGCCTTCTGGGTGGACTAATGGCCTTGGGATACACAATAGCTACTATCCTTAAGAGAAACAGCCATGTCCTTTCTGATGATAGGATTTGTGTTAAACTAGATTGGCTTGAGCAACTTAATCGACATTATGTTCAGGTACAAGGAAGAGATCGCTTAGTTGTACAATATATAGGGCAGCAGCTGGGCCTAGAAGGTTCCTACATTCCTCGTACCTACATTGAGCAAATTCAACTTGAAAAGCTTGTGAATGAGGTTATGGCCCTACCAGATGATTTGAAGACCAAGCTCAGCTTAGATGAGGATTTGGTGTCAAGCCCCAAAGAAGCACTTTCTAGAGCCTCTGCTGACAGAGTTGCCATGAGAAATAAACATCTGAGGAGTGGAATGTCACAGTCATATACCAATCATAGGGACAAAAATCTAGCCAAGGTTACTGGATATGTTGCCAACAATCATGGTTTTGGTGATAGGAATTCAGATTCCACCACAATGGCAGTAAATCAGGGAGCCATCAGTCAGTTATCAGACCAAATTTCTGCTCTCAATGATAGAATGGATGAGTTTACAAATCGTATTGAAGAGCTGAACTCCAAGTTAATCATCAAGAAAAATTCTCCAAGCCAACAAAATATGTCACTTCAAGCTGAGGCTTGCAATGGTTCTGCTCCCACCTCTTACTTCATCACTAGTTTGGGTAATGGTTCCCTAACAGGATCTAAAATGGCAAATTCCACATCATCATCACAGTTAGCTAAAGATTCTCCTTTAATGGATGAGCTATCAGGCATTGCACGTGGTCAGCGTCAGATCATGCATCAATTGGACAATCTCAATAATCTTCTGAGGGGAAACTTGGGGGAGAAGTCTCACCAAACAAGAAACAATAGGAAAACCATAGAAACAACATCAGATTCCACGGGAGCTCGTGCTATGGTGGTAGTGGCTGTGGGATGTTTGGGGATCTTCTTGATGAAGGGTTTGTTGAACCGAAAGTGA 1992 0.4111 MAKDNSDSDSHNRRLGLLKDQVNLVKRRDSNRYEIAPILDQLSFEKGFFIVIRACQLLAQKNDGIILVGVAGPSGAGKTVFTEKILNFIPSVAVISMDNYNDASRIVDGNFDDPRLTDYDTLLQNLHDLKEGKPVEVPIYDFKSSSRTGYRTVESPSSRIVIIEGIYALSEKLRPLLDLRVSVTGGVHLDLVKRVIRDIQRAGQEPEEIIHQISETVYPMYKAFIEPDLQTAHIKIINKFNPFTGFQSPTYILKSARNVTADQIKAVLSEDFKETTEQTYDIYLLPPGEDPETCQSYLRMRNKDGKYSLMFEEWVTDNPFVISPRITFEVSVRLLGGLMALGYTIATILKRNSHVLSDDRICVKLDWLEQLNRHYVQVQGRDRLVVQYIGQQLGLEGSYIPRTYIEQIQLEKLVNEVMALPDDLKTKLSLDEDLVSSPKEALSRASADRVAMRNKHLRSGMSQSYTNHRDKNLAKVTGYVANNHGFGDRNSDSTTMAVNQGAISQLSDQISALNDRMDEFTNRIEELNSKLIIKKNSPSQQNMSLQAEACNGSAPTSYFITSLGNGSLTGSKMANSTSSSQLAKDSPLMDELSGIARGQRQIMHQLDNLNNLLRGNLGEKSHQTRNNRKTIETTSDSTGARAMVVVAVGCLGIFLMKGLLNRK* 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1339 663 PANTHER URIDINE KINASE 5 654 - -
Apr7g1339 663 ProSiteProfiles CYTH domain profile. 248 410 IPR023577 -
Apr7g1339 663 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 60 236 IPR027417 -
Apr7g1339 663 PRINTS Uridine kinase signature 65 82 - -
Apr7g1339 663 PRINTS Uridine kinase signature 132 147 - -
Apr7g1339 663 PRINTS Uridine kinase signature 188 198 - -
Apr7g1339 663 PRINTS Uridine kinase signature 224 237 - -
Apr7g1339 663 CDD UMPK_like 67 239 - -
Apr7g1339 663 Gene3D - 66 247 IPR027417 -
Apr7g1339 663 Coils Coil 503 537 - -
Apr7g1339 663 PANTHER PHOSPHORIBULOKINASE/URIDINE KINASE-LIKE PROTEIN 5 654 - -
Apr7g1339 663 SUPERFAMILY CYTH-like phosphatases 262 407 IPR033469 -
Apr7g1339 663 Pfam CYTH domain 252 404 IPR023577 -
Apr7g1339 663 Pfam Phosphoribulokinase / Uridine kinase family 68 236 IPR006083 GO:0005524|GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1339 Apr-Chr7 20476502 20485300 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1339 66 236 PRT Gene Family AT5G40870 27.222 3.18e-17 83.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1339 K00876 - gmx:100781286 1179.47