Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1332 ATGAATATAAAATATCTTACACAGAAGTTAAGAACTTATCTTTCACATACATTTTCGTCTAATATATATTCCATAGTAAACAGAACAACATCTTTTCATTCATCAGCGGTTGTGACTAACAACATGTCCAGCACTTCTGGTCTTGTGATCCCCTGCAAAGCTGCTGTTTCATGGGAAGCAGGGAAACCGTTGGTGATAGAACGTGTGGAGGTGGCACCACCACAGGTGATGGAAGTGAGGATCAAAGTCAAATATACCTCACTTTGCCACACTGATCTTTACTTCTGGGAAGCCAAGGGGCACACTCCTCTGTTTCCCCGGATTTTTGGCCATGAGGCAGCTGGAATTGTGGAGAGTGTTGGAGAAGGGGTCTCAGAACTGCAGGTAGGGGATCATGTGCTACCTGTATTCACTGGGGAATGTGGTGAGTGTGCACATTGCAAATCTGAGGAAAGCAACATGTGTGACCTGTTGCGAATTGATACAAACCGAGGAGTCATGCATAGTGATGGTAAAAGCAGGTTCTCCATTAATGGTACCCCAATAAACCACTTTGTTGGCACATCAACTTTTAGTGAATACACTGTGGTACATTCTGGCTGCTTAGCAAAGATCAATCCACAAGCACCTATGGATAAAGTCTGTGTCCTCAGTTGTGGCATCTCAACGGGATTAGGAGCCGCTTTAAATGTAGCAAAACCAAAGAAGGGCTCTACAGTAGCAATCTTTGGGCTAGGAGCTGTTGGCCTTGCTGCTGCTGAGGGAGCAAGAATAGCTGGTTCATCTAGAATTATTGGAGTTGATTTGAACCCAAAGAGGTTTGAGGAAGCCAAAAAGTTTGGAGTAACTGAGTTTGTGAATCCCAAGGACTACGATAAGCCGGTTCAACAGGTAATTGCAGATATGACAAATGGAGGAGTTGATAGAAGTATAGAGTGCACTGGAAACATCAATGCCATGATATCCGCTTTCGAATGTGTTCATGATGGGTGGGGTGTTGCTGTGCTTGTTGGAGTACCCAACAAGGATGCGGTTTTCATGACCAAGCCCATTAATGTGCTCAACGAAAGAACACTCAAGGGAACTTTCTTTGGAAATTACAAGCCCAGGACTGACCTCCCTTACGTTGTTGAAATGTATATGAATAAGAAATTGGAACTGGACAAGTTTATAACCCATAGAGTTCCTTTCTCCGATATCAACAAGGCATTTGAATTAATGTTGAAAGGAGAGGGACTAAGGTGTATCATTAGCATGGAAGACTAG 1266 0.4336 MNIKYLTQKLRTYLSHTFSSNIYSIVNRTTSFHSSAVVTNNMSSTSGLVIPCKAAVSWEAGKPLVIERVEVAPPQVMEVRIKVKYTSLCHTDLYFWEAKGHTPLFPRIFGHEAAGIVESVGEGVSELQVGDHVLPVFTGECGECAHCKSEESNMCDLLRIDTNRGVMHSDGKSRFSINGTPINHFVGTSTFSEYTVVHSGCLAKINPQAPMDKVCVLSCGISTGLGAALNVAKPKKGSTVAIFGLGAVGLAAAEGARIAGSSRIIGVDLNPKRFEEAKKFGVTEFVNPKDYDKPVQQVIADMTNGGVDRSIECTGNINAMISAFECVHDGWGVAVLVGVPNKDAVFMTKPINVLNERTLKGTFFGNYKPRTDLPYVVEMYMNKKLELDKFITHRVPFSDINKAFELMLKGEGLRCIISMED* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1332 421 Pfam Alcohol dehydrogenase GroES-like domain 78 204 IPR013154 -
Apr7g1332 421 Pfam Zinc-binding dehydrogenase 247 372 IPR013149 -
Apr7g1332 421 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 110 124 IPR002328 GO:0008270|GO:0016491
Apr7g1332 421 PANTHER ALCOHOL DEHYDROGENASE 1-LIKE 44 419 - -
Apr7g1332 421 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 210 384 IPR036291 -
Apr7g1332 421 Gene3D - 60 411 - -
Apr7g1332 421 CDD alcohol_DH_plants 50 417 - -
Apr7g1332 421 SUPERFAMILY GroES-like 45 227 IPR011032 -
Apr7g1332 421 Gene3D - 224 362 - -
Apr7g1332 421 SUPERFAMILY GroES-like 369 417 IPR011032 -
Apr7g1332 421 PANTHER ALCOHOL DEHYDROGENASE 44 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1332 Apr-Chr7 20417107 20421298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1332 78 411 Monolignol Biosynthesis Gene Families AT1G72680 23.599 2.32e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1332 K18857 - qsu:112034402 697.197