Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1328 ATGGAAAGCTGCGTGAGCAACAGTGATAGGAAGGAACAGTGGAGAGCAGAGGAAGCCATTGGTGGGAACGCGGAAGCTCTTCAAGCCCTCAGAGAACTCATCATATACCCTTTCCTCTTCTCTCAACAAGCCCGCAAACTTGGCCTTAAAGTTCATTTTCATTTCATTTCAATTTCATTTCCATTTCTTCCTCTCCTTCTTTCTAACCTTTTTCCCCTTTCATTTGCCTTTGCTTCATTGCAGTGGCCAAGAGGGTTGCTTCTCTACGGTCCACCGGGCACTGGAAAGACGAGTTTGGTACGAGCAGTAGTTCGGGAATGTGGTGCACATTTGACAATTATCAGTCCACACTCTGTCCTTAGAGCACATGCTGGTGAGAGTGAGAGAATTCTTCGTGAGGCCTTTTCAGAGGCAGCATCTCATGTAGCCTTGGGAAAGCCATCAGTTGTTTTTATTGATGAAATAGATGCACTCTGTGCTCGTCGAGATTCCAAACGGGAGCAAGATGTCCGAGTTGCCTCCCAACTCTTAACACTGATGGACTCAAATAAACCAACCTTTACAACAGGTGTAGTTGTGGTTGCATCAACTAACAGAGTGGATGCAATTGACCCTGCCCTAAGAAGGTATGGACGTTTTGATGCTGAAATTGAAGTTACTGTCCCAAATGAAGAGGAGCGCTTTCAAATTCTGAAGCTGTACACAAAGAAGATTCCCTCAGATTGTAGTGTGGACTTAAAGTCCATTGCCGCATCATGCAATGGATATGTTGGAGCTGATTTGGAGGCTTTATGTCGTGAAGCTACCTTGTTTGCAATTAAAAGGTTCTCTAATATAAATGAAGACACAAGTAATTTTAGTTTAACAACGGAAGATTGGAATTATGCAAGGTCTGTTGTTGGTCCAAGTGTAACACGAGGTGTTACTGTGGAAATCCCCAAAGTGACTTGGGAAGACATTGGAGGATTAAAAGAATTGAAGAAAAAGCTCCAGCAAGCAGTTGAATGGCCTATTAAGCATTCTGCTGCATTTTCAAGATTAGGAATACCTCCTGTACGTGGAATTCTTCTCCATGGACCTCCGGGATGTTCCAAAACTACCATTGCCAAAGCTGCTGCACATGCTGCTCAAGCTTCTTTCTTTTCCTTGAGTGGTGCAGAACTGTATTCAATGTATGTTGGAGAGGGGGAAGCTTTGCTTCGTAAAACATTTCAGAAAGCGCGCCTTGCAGCACCGAGTATAATATTCTTTGATGAAGCTGATGTGGTAGCTGCCAAGCGGGGTGATAGTTCAAGCAATAGTGCTACTGTTGGAGAGAGGCTTTTATCCACTCTGCTGACTGAGATTGATGGCTTAGAAGAAGCTAAAGGAATTCTTGTTTTGGCGGCTACAAATCGCCCCTATGCAATTGATGCTGCACTTATGCGTCCTGGGCGTTTTGATCTGGTTCTGTATGTGCCACCACCTGATTTGGAGGCTCGATATGAGATACTTTGTGTACATACTCGCAAAATAAAACTAGGTGGTGATGTTGATCTCAGAGGGCTAGCAGAAGATACAGAGCTCTTCACAGGTGCTGAACTGGAGGGATTATGCAAGGAAGCTGGAATTGTAGCTCTGAGGGAAGACATATCTGCTACTGTTGTTTGTGACCGTCATTTTCAGATATCAAAGAATTCCTTAAAACCACAATTAACAAAAGCGGAAATTGATTTATACTCATCTTTTATGAAGACCTCATCTAGACATAGCATTTGA 1758 0.4346 MESCVSNSDRKEQWRAEEAIGGNAEALQALRELIIYPFLFSQQARKLGLKVHFHFISISFPFLPLLLSNLFPLSFAFASLQWPRGLLLYGPPGTGKTSLVRAVVRECGAHLTIISPHSVLRAHAGESERILREAFSEAASHVALGKPSVVFIDEIDALCARRDSKREQDVRVASQLLTLMDSNKPTFTTGVVVVASTNRVDAIDPALRRYGRFDAEIEVTVPNEEERFQILKLYTKKIPSDCSVDLKSIAASCNGYVGADLEALCREATLFAIKRFSNINEDTSNFSLTTEDWNYARSVVGPSVTRGVTVEIPKVTWEDIGGLKELKKKLQQAVEWPIKHSAAFSRLGIPPVRGILLHGPPGCSKTTIAKAAAHAAQASFFSLSGAELYSMYVGEGEALLRKTFQKARLAAPSIIFFDEADVVAAKRGDSSSNSATVGERLLSTLLTEIDGLEEAKGILVLAATNRPYAIDAALMRPGRFDLVLYVPPPDLEARYEILCVHTRKIKLGGDVDLRGLAEDTELFTGAELEGLCKEAGIVALREDISATVVCDRHFQISKNSLKPQLTKAEIDLYSSFMKTSSRHSI* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1328 585 CDD AAA 321 488 - -
Apr7g1328 585 PANTHER AAA-FAMILY ATPASE 24 562 - -
Apr7g1328 585 Gene3D - 4 222 IPR027417 -
Apr7g1328 585 Gene3D - 305 489 IPR027417 -
Apr7g1328 585 ProSitePatterns AAA-protein family signature. 458 476 IPR003960 GO:0005524|GO:0016887
Apr7g1328 585 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 90 109 - -
Apr7g1328 585 PRINTS Endopeptidase La (Lon) serine protease (S16) signature 436 455 - -
Apr7g1328 585 Pfam ATPase family associated with various cellular activities (AAA) 355 487 IPR003959 GO:0005524|GO:0016887
Apr7g1328 585 Pfam ATPase family associated with various cellular activities (AAA) 86 219 IPR003959 GO:0005524|GO:0016887
Apr7g1328 585 Gene3D - 223 304 - -
Apr7g1328 585 PANTHER CELL DIVISION CONTROL PROTEIN 48 HOMOLOG B 24 562 - -
Apr7g1328 585 Pfam AAA+ lid domain 243 278 IPR041569 -
Apr7g1328 585 Pfam AAA+ lid domain 510 555 IPR041569 -
Apr7g1328 585 Gene3D - 490 581 - -
Apr7g1328 585 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 20 279 IPR027417 -
Apr7g1328 585 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 313 576 IPR027417 -
Apr7g1328 585 CDD AAA 83 219 - -
Apr7g1328 585 SMART AAA_5 82 223 IPR003593 -
Apr7g1328 585 SMART AAA_5 351 490 IPR003593 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1328 Apr-Chr7 20385687 20392909 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1328 267 570 Calmodulin-binding Proteins AT3G56690 32.407 9.14e-39 150
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1328 - - gmx:100814288 926.391