Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1244 ATGAAACTGAGTTGCAATGGGTGTCGCATTCTCCGTAAAGGCTGCAGCGAAGACTGCATCATTAGGCCTTGCCTTGAGTGGATCAACTCTCCTGAGTCCCAAGCCAACGCCACCCTTTTCCTTGCCAAATTCTATGGCCGTGCTGGCTTGCTCAACCTCATCAATGCTGCACAGCCACACCTTCGCGCAGCTGTGTTCAAGTCACTGATGTATGAGGCATGTGGGAGAATTGTGAACCCAGCTTATGGGGCACTGGGTTTGTTCTGGACCGGGGAGTGGGCCCGATGTCAAACAGCGGTCGATGCAGTGCTGAATGGCTCCGAAATCATTACCGTGGAACCTTCTGATTGGGAGGGTATGAGGACACGTGGCAGTGAGCATGGTTCTCCTGTTCTTGACATTCGCCACGTGTCCAAGAGAACAGGGAATGTGATTCGGCCCAAGCCGCGAATCGGCTCAGTTGACTCGGCTGCGCTGTGGAATCCAGTCTGTGGGGAAGAGCAAAGAGGGCGCGAGAGATGTAGGAGCCGGGAAACGTACGAGGCCTCTTTGATTAGGCGAGACAAGCAGAGCCGAAACGGTGTAGCCGAGTTGAATTTGGAGCTCACTCTTGGCTCAGGCTTTTCAGCCAGCTCAGTGTCGAGCGTTAGAGGATACGGTCGTGTTTAA 669 0.5396 MKLSCNGCRILRKGCSEDCIIRPCLEWINSPESQANATLFLAKFYGRAGLLNLINAAQPHLRAAVFKSLMYEACGRIVNPAYGALGLFWTGEWARCQTAVDAVLNGSEIITVEPSDWEGMRTRGSEHGSPVLDIRHVSKRTGNVIRPKPRIGSVDSAALWNPVCGEEQRGRERCRSRETYEASLIRRDKQSRNGVAELNLELTLGSGFSASSVSSVRGYGRV* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1244 222 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Apr7g1244 222 PANTHER LOB DOMAIN PROTEIN 1 212 - -
Apr7g1244 222 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Apr7g1244 222 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1244 Apr-Chr7 19488459 19489632 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1244 1 146 AS2 family AT1G67100 58.904 2.01e-59 185
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Apr7g1244 LOB 2.5e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1244 - - gmx:100789066 258.07