Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1222 ATGCAATCCCCATTCTCACCATCCACTCTCATTCTTCTCGCCTCCCTTTTCTCCCTGTCGTTTCACTCTCCCGTCGTCGTTCACGCCTCCACGAACCCCGATTTCCATCCCCTCATGTCTTTTAAAGCCTTATCCGACACTTCCAACAAACTCACCAAATGGAACGCAACCTCCACAAACCCATGCACCTGGAACGGCGTTTCCTGTCTCAGGAACCGCGTCTCTCGCCTCGTCCTCGAAGACCTCAACCTCACCGCCTCCTTCCACCCCTTAACCTCTCTCACCCAACTCCGAATCCTAAGCCTAAAACGCAACCGTTTCAACGGTCCCATTCCCAATCTCACAACCCTCTCCGCCCTCAAGCTTCTCTTCCTCTCTCACAACCAATTCTCCGGCGAGTTCCCGGTCACCGTCACGTCGCTCGCCCGCTTGTACCGCCTCGATCTCTCTCACAACAACCTCTCCGGCGAGATTCCGGCTACGGTTAACCGTTTGACTCACCTTCTGACCCTCCGCGTCGACGTTAACAAAATCCACGGCCACATTCCCAGCATTACCCTCTCTCATCTCCAAGACTTCAACGTCTCAAGTAACCATCTCTCGGGTCAAATACCCGAATCTCTGTCGGGTTTTCCCGGATCCGCTTTCTCTCATAACCCTTATCTTTGTGGGGTCCCGTTGCAGAAATGTAAAGCCATGCCAGCCCTCGCTTCTCCGTTGAATACCCGAAACGACACCGTAACGACAAAACCTGAGAACGAAGCCGTACAAGGGAGTAAAACCCGTGAAGGAAACGGCGCTCCGAAAATGGGGGCAATGGTTTTAATAGCCATTGTTCTCGGCGATCTTATGGTGCTTGCATTAGTGTCCCTGCTTCTCTATTACTACTACTGGAGAAACTACACTAAGTTGAGGGAGGGGCAAAATGAGTCGAATTTGAAAAATTCGAAGGGTTTGGAAAGTGAAAAAGTGAGTGCTTATTCGGGGCAAAGAGGCGTGGGGAAGGGTGGAACTGAAATGGTGTTTTTGGAAGGGGTGAAGAGGTTTGAGTTGGAAGAGTTGTTGCGTGCCTCTGCGGAGATGTTGGGGAAGGGTGCGTTGGGTACGGCTTATAAAGCTGTTCTTGATGATGGGACTGTGGTTGCCGTGAAGAGGTTGAAGGATGCGAACGTGGGAGGGAAGAGGGAGTTCGAGCAGCGAATGGAAGTGCTGGGGAGGTTGAGACACGACAACGTTGTTAGTTTGAGGGCTTACTATTTCGCCAGGGAGGAGAAGTTGCTCGTCTCTGATTACATGCCCAATGGTACCCTTTTCTGCCTCCTTCACGGTAACCGAGGACCGGGGCGAACCCCGCTAGACTGGACCACGAGGCTGAAGATAGCAGCTGGAGCGGCACGAGGCGTGGCCTTCATTCACAGCTCCAGTAATCATAAACTCACTCACGGCAACATCAAATCCACAAACGTCCTTGTCGACGTGGCAGGCAACGCGCGCGTCGCCGATTTCGGGCTCTCCATCTTCGCAAGCCCATCAAACTCACGATCCAACGGCTACCGCGCGCCTGAGGCATCTGACGGCCGAAGACGGACCCAGAAGTCTGACGTGTACTCCTTCGGCGTTCTGCTGATGGAGATGCTGACGGCAAAGTGTCCCTCCACCGTGGACGGCGGCGCATTGGCGGTGGCGGTGGACTTACCTAGGTGGGTCCAGTCGGTGGTGAGGGAGGAGTGGACGGCTGAAGTGTTCGATCTTGAACTGCTGAGATATAAGGATATTGAGGAGGAGATGGTGGCGCTGCTGCAGATAGCTATGGCGTGCACTGCGACCGCGCCTGATCAACGGCCGAGGATGAGCCACGTGGTCAATATGATCGAAGAGTTGCGTGGGGTCCAGGTGTCGTCCTGTCATGACACGTTAATTGACTCGGTGTCTGAGTACACTTCCGTGTCTGAAGATGCGTGCAGGGGAGCTGGAGGTGGAGCTTCTAGCCTATGA 1995 0.5398 MQSPFSPSTLILLASLFSLSFHSPVVVHASTNPDFHPLMSFKALSDTSNKLTKWNATSTNPCTWNGVSCLRNRVSRLVLEDLNLTASFHPLTSLTQLRILSLKRNRFNGPIPNLTTLSALKLLFLSHNQFSGEFPVTVTSLARLYRLDLSHNNLSGEIPATVNRLTHLLTLRVDVNKIHGHIPSITLSHLQDFNVSSNHLSGQIPESLSGFPGSAFSHNPYLCGVPLQKCKAMPALASPLNTRNDTVTTKPENEAVQGSKTREGNGAPKMGAMVLIAIVLGDLMVLALVSLLLYYYYWRNYTKLREGQNESNLKNSKGLESEKVSAYSGQRGVGKGGTEMVFLEGVKRFELEELLRASAEMLGKGALGTAYKAVLDDGTVVAVKRLKDANVGGKREFEQRMEVLGRLRHDNVVSLRAYYFAREEKLLVSDYMPNGTLFCLLHGNRGPGRTPLDWTTRLKIAAGAARGVAFIHSSSNHKLTHGNIKSTNVLVDVAGNARVADFGLSIFASPSNSRSNGYRAPEASDGRRRTQKSDVYSFGVLLMEMLTAKCPSTVDGGALAVAVDLPRWVQSVVREEWTAEVFDLELLRYKDIEEEMVALLQIAMACTATAPDQRPRMSHVVNMIEELRGVQVSSCHDTLIDSVSEYTSVSEDACRGAGGGASSL* 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1222 664 MobiDBLite consensus disorder prediction 511 530 - -
Apr7g1222 664 Gene3D Ribonuclease Inhibitor 92 234 IPR032675 -
Apr7g1222 664 Gene3D Ribonuclease Inhibitor 26 91 IPR032675 -
Apr7g1222 664 SUPERFAMILY Protein kinase-like (PK-like) 360 624 IPR011009 -
Apr7g1222 664 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 25 639 - -
Apr7g1222 664 Pfam Leucine rich repeat N-terminal domain 32 69 IPR013210 -
Apr7g1222 664 PANTHER - 25 639 - -
Apr7g1222 664 MobiDBLite consensus disorder prediction 241 264 - -
Apr7g1222 664 SUPERFAMILY L domain-like 40 230 - -
Apr7g1222 664 Gene3D Phosphorylase Kinase; domain 1 330 431 - -
Apr7g1222 664 CDD STKc_IRAK 362 627 - -
Apr7g1222 664 Pfam Protein kinase domain 360 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1222 664 ProSiteProfiles Protein kinase domain profile. 356 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g1222 664 Gene3D Transferase(Phosphotransferase) domain 1 432 645 - -
Apr7g1222 664 MobiDBLite consensus disorder prediction 241 260 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1222 Apr-Chr7 19308925 19312197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1222 34 656 Receptor kinase-like Gene Family AT1G68400 62.577 0.0 746
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Apr7g1222 Pkinase 2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1222 - - gmx:100810749 860.136