Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1214 ATGGGCAGCACGTACATGTGCGCGTTATTATTGTCATCTGCTTTATTACTTCACTCTTATTTGGTCATTGCCCAAGAGCAAAAGGTGGCCGTATCTGATAGACAAAAAACATCGCATTTCAAAGGCAGTGAAAGCGATTTTTATTGGTTCTGGCATTGGCATTGGCATTTCCCTCCACCGGCGGAGTGTCCTCCACCTCCGTCACCTCCACCTCCGTCACCTCCTCCTCCATCGCCTCCTCCTCCGTCGCCTCCACCTCCATCACCTCCACCTCCGTCCCCTCCACCTCCATCACCTCCGCCTCCGTCCCCCCCACCTCCGTCGCCTCCTCCTCGGCCGCCACCTCCACCTCCTCCCCCTCCACCGCCACCCGTGAACCTGCTGGAGAGAGCCCGCAAAGCGCTCCTAAATTTCACTCGTTTCGTGGATGACCCAACGGGATACACGCGAAACTGGAAGGCTGGGACGGACCCATGTAACTACAACGGGGTGCGATGTGCGCAGTTTCCAAAATCAAATCAGCGAGCAGTTGCGGGGCTGAGCCTGAACGGAGCAAGCCTGTCTGGGAAGAACGGTGCAGATCTGCCTCTCTCGGGCATCTTGGACAGGATACCAGAGCTCACATTCTTCCATGTCAACACCAACAACTTCACCGGTGCCATCCCAACTGAAATCACCAAATACAAATATTTCTACGAGTTAGACGTCAGCAACAACAAACTAGAGGGGGAGTTCCCAAAGCAAGTGCTTCAGTCCAAGCTGCTGGTGTTCTTGGACCTCAGGTTCAACCGTCTCTGCGGCCCAATTCCGCCACAGCTGTTTCAGTTGGATTTGGATATTATTTTCATCAACAACAATAAATTCAGTGGCAATCTCCCCGATAACTTGGGCTCCACGCCGGCCAGGTTCATCACTTTTGCCAACAACAAACTCACGGGTCCAATCCCGAGAAGCATTGGGCAGGCTTCCAAAACCCTCACCGAAGTGCTCTTCTTAGGCAACCAATTTAAGGGCTGCTTGCCCTACGAAATTGGGTACCTGAAAAAGGCAACGGTCTTTGATGTGAGCAAAAACTGGTTAACGGGTCCAATCCCACGCTCCTTTGGCTGCTTGGAAAGCATTCGGTTCCTGAACTTGGAACACAATCAGTTTTACGGAGAAGTTCCCGAGATGGTTTGTCAGCTTTCAGGGATACGCAACGATGGGAAACTCTCTTTATCGGGCAACTATTTCACTCAGGTTGGTCCTTCATGCAGGAAGCTCATAGAGGACAACATCCTTGACATCAGCTACAACTGCATCCTCGGACTTCCCAACCAAAGACCCCACGGAGAGTGCACTCGTTTTTTCTCCCACGTCAATCCCTGCCCGAATCACAAGTCTCTCTTTTACGTCCCTTGTAAGCAATACCGCTCTCACTACCATTCCAACTCGCTTCACCAAACCCCCTCTCCTCCGGTAACTTACAACTCTCTCATCCCTCATCATCGCTAG 1494 0.5207 MGSTYMCALLLSSALLLHSYLVIAQEQKVAVSDRQKTSHFKGSESDFYWFWHWHWHFPPPAECPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPPSPPPRPPPPPPPPPPPPVNLLERARKALLNFTRFVDDPTGYTRNWKAGTDPCNYNGVRCAQFPKSNQRAVAGLSLNGASLSGKNGADLPLSGILDRIPELTFFHVNTNNFTGAIPTEITKYKYFYELDVSNNKLEGEFPKQVLQSKLLVFLDLRFNRLCGPIPPQLFQLDLDIIFINNNKFSGNLPDNLGSTPARFITFANNKLTGPIPRSIGQASKTLTEVLFLGNQFKGCLPYEIGYLKKATVFDVSKNWLTGPIPRSFGCLESIRFLNLEHNQFYGEVPEMVCQLSGIRNDGKLSLSGNYFTQVGPSCRKLIEDNILDISYNCILGLPNQRPHGECTRFFSHVNPCPNHKSLFYVPCKQYRSHYHSNSLHQTPSPPVTYNSLIPHHR* 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1214 497 MobiDBLite consensus disorder prediction 475 489 - -
Apr7g1214 497 PRINTS Proline rich extensin signature 59 75 - -
Apr7g1214 497 PRINTS Proline rich extensin signature 77 94 - -
Apr7g1214 497 PRINTS Proline rich extensin signature 95 120 - -
Apr7g1214 497 Pfam Leucine rich repeat N-terminal domain 131 166 IPR013210 -
Apr7g1214 497 Gene3D Ribonuclease Inhibitor 128 301 IPR032675 -
Apr7g1214 497 MobiDBLite consensus disorder prediction 63 127 - -
Apr7g1214 497 MobiDBLite consensus disorder prediction 475 497 - -
Apr7g1214 497 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 98 483 - -
Apr7g1214 497 PANTHER BNAC05G26270D PROTEIN 98 483 - -
Apr7g1214 497 SUPERFAMILY L domain-like 131 438 - -
Apr7g1214 497 Gene3D Ribonuclease Inhibitor 302 462 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1214 Apr-Chr7 19141266 19143039 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1214 128 456 Trihelix Transcription Factor Family AT1G12040 40.719 2.01e-76 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1214 - - gmx:100781083 587.415