Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1203 ATGACAATTACCGTGGACCCATCGGGGAATGGAAACTTCTCTACAATACAATCTGCTATTGATTCAGTCCCTTCCAACAATGCGTATTGGATTACCATTTATGTGAAGGCAGGCAGATACAGGGAAAAGGTGACGATCCCTAATGACAAGCCATACATCACACTACAAGGAGAGGGACAAGATAACACTTTTGTTGAATGGAATGACCATGATTCAATTGCACGGAGTGCTACATTCTCAACCATGGCAAACAACGTTGTCGTTAAGCACATTAGCTTTAGGAATTCATACAATAATCCAAAAAATGGTAACCCCATTGTAGCTGCCGTAGCAGCAATGGTCAGCGGCGACAAGTCATACTTCTTAAATGTTGGCTTCTATGGTCTGCAAGACACTTTATGGGATGACCAAGGAAGACATTACTACAACATTTGCACCATTGAAGGAGCTGTGGATTTTATCTTTGGTACAGGCCAATCTCTATATGAGGAGTGTACTATATCAGTCATTGGTGCAGCTCTAGCTCCAGGAGTACCTGGTTATATCACTGCACAAGGGAGAACAAATCCAAACGATGGAAATGGGTTTGTTTTCAAGAATTGCCAAGTCTCTGGAAATGGCACAACGTACCTGGGGAGACCATGGAGAAGCTACGCAAGAGTTCTTTTTTACAAGACTAGTATGTCCCAGATTGTACAACCAAGTGGTTGGGAGCCATGGAATTTCGCTGGACACGAGGATCAGTTAACATTCGCAGAATATGAGAATTCTGGACCTGGTTCTGACACTTCTAAGAGAGTGAAATGGACAAAGAAACTGAGTTTAGAGACAGTTAATGCGATGGCAAGTCTTAGCTTCGTTGACAATGACGGTTGGTTGAAGGATTTGGCTCTTTTCTTTTACGAGAATGTAGAACCGTTTGTTGAAAGAGTTATAACAGATTTTGATCTTGTTAGTATCAGAACTAGCCCGATTTCAAACTCTAGTGTCAAGTTTAAGTGTGAAGAGTGTCTGAAATCCATTAGAGAGTGGTGTTCTCAAAGAGGTGCTTGGTGTCGCCACCTTCAAACTCACACGCCACTCCTAGAAGTCCACGCTCCGCCACTTGTTCCTCATGCATCCATATGCCTGCTAAAGGTTGAAGAAGTTGACGTCACCGTCATGTACACTCCTCCTACGTCAGACAGAGAAAATTAG 1197 0.4294 MTITVDPSGNGNFSTIQSAIDSVPSNNAYWITIYVKAGRYREKVTIPNDKPYITLQGEGQDNTFVEWNDHDSIARSATFSTMANNVVVKHISFRNSYNNPKNGNPIVAAVAAMVSGDKSYFLNVGFYGLQDTLWDDQGRHYYNICTIEGAVDFIFGTGQSLYEECTISVIGAALAPGVPGYITAQGRTNPNDGNGFVFKNCQVSGNGTTYLGRPWRSYARVLFYKTSMSQIVQPSGWEPWNFAGHEDQLTFAEYENSGPGSDTSKRVKWTKKLSLETVNAMASLSFVDNDGWLKDLALFFYENVEPFVERVITDFDLVSIRTSPISNSSVKFKCEECLKSIREWCSQRGAWCRHLQTHTPLLEVHAPPLVPHASICLLKVEEVDVTVMYTPPTSDREN* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1203 398 ProSitePatterns Pectinesterase signature 1. 27 46 IPR018040 -
Apr7g1203 398 PANTHER PECTINESTERASE 10-RELATED 2 297 - -
Apr7g1203 398 Pfam Pectinesterase 3 284 IPR000070 GO:0030599|GO:0042545
Apr7g1203 398 SUPERFAMILY Pectin lyase-like 2 295 IPR011050 -
Apr7g1203 398 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 2 297 - -
Apr7g1203 398 ProSitePatterns Pectinesterase signature 2. 147 156 IPR033131 -
Apr7g1203 398 Gene3D - 1 303 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1203 Apr-Chr7 19002259 19007714 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1203 3 294 Carbohydrate Esterase AT1G05310 42.475 1.89e-80 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1203 - - aprc:113870328 829.706