Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1184 ATGCTGAGTGTTCTCTCTGAGTGGAGCAGAGAGCAGGATAAAGCATTTGAAAATGCCTTGGCAACTTATCCAGAAGATGCCCCAGATCGATGGGAGAAGATTGCGGCTGATGTGCCAGGAAAGACTATAGAAGAAATCAAACTTCATTATGAGCTCTTGGTTGAAGATATTAACCAGATCGAATCTGGTTGTGTGCCTCTACCCCCTTATAATTCTTCTTCAGAGGGCTCAGCAAGCCATGCTAGTGATGATGGTGCTGGCAAGAAGGGTGGCAGTCACGGGCATTATAGCAGTGAGTCTAATCATGGAACTAAGCCCTCAAGATCCGATCAGGAACGACGAAAGGGTATTGCTTGGACAGAGGATGAACACAGGTTATTTCTTCTGGGCTTGGATAAGTATGGAAAAGGTGACTGGCGAAGTATTTCAAGGAACTTTGTAGTGACAAGAACTCCTACACAAGTAGCAAGCCATGCTCAAAAATATTTCATCCGTTTGAACTCAATGAACAAGGATAGAAGGCGATCCAGCATACATGATATCACCAGTGTTAACAATGGAGACATTTCAGCACCTCAAGGGCCAATCACTGGTCAAACGAACGGTTCTGCTGGAAATTCTACTGGGAAAGTGACCAAACAAGCTCCTCCAGCCTCAACTGGGGTGCCAGGTGTTGGAATATATGCTGCTCCTACCATTGGACAACCTATAGGAGGACCCTTAGTATCTGCTGTTGGCACCCCAGTGAATCTTCCTGCCCCTGCACACATGGCATACGGCGTCCGAGCCTCGGTTCCCGGTGCAGTTGTACCTGGTGCACCAATGAACATGGGCCCTGTGACATATCCTATGCCTCATACATCTGCTCCTCATAGGTGA 879 0.4733 MLSVLSEWSREQDKAFENALATYPEDAPDRWEKIAADVPGKTIEEIKLHYELLVEDINQIESGCVPLPPYNSSSEGSASHASDDGAGKKGGSHGHYSSESNHGTKPSRSDQERRKGIAWTEDEHRLFLLGLDKYGKGDWRSISRNFVVTRTPTQVASHAQKYFIRLNSMNKDRRRSSIHDITSVNNGDISAPQGPITGQTNGSAGNSTGKVTKQAPPASTGVPGVGIYAAPTIGQPIGGPLVSAVGTPVNLPAPAHMAYGVRASVPGAVVPGAPMNMGPVTYPMPHTSAPHR* 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1184 292 CDD SANT 7 54 IPR001005 -
Apr7g1184 292 MobiDBLite consensus disorder prediction 182 218 - -
Apr7g1184 292 SUPERFAMILY Homeodomain-like 113 168 IPR009057 -
Apr7g1184 292 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 110 167 IPR017930 -
Apr7g1184 292 ProSiteProfiles Myb-like domain profile. 6 54 IPR001005 -
Apr7g1184 292 Gene3D - 117 169 - -
Apr7g1184 292 ProSiteProfiles SANT domain profile. 3 58 IPR017884 -
Apr7g1184 292 SUPERFAMILY Homeodomain-like 7 62 IPR009057 -
Apr7g1184 292 MobiDBLite consensus disorder prediction 182 215 - -
Apr7g1184 292 Pfam Myb-like DNA-binding domain 7 50 IPR001005 -
Apr7g1184 292 Pfam Myb-like DNA-binding domain 118 163 IPR001005 -
Apr7g1184 292 CDD SANT 118 163 IPR001005 -
Apr7g1184 292 MobiDBLite consensus disorder prediction 68 115 - -
Apr7g1184 292 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 115 165 IPR006447 GO:0003677
Apr7g1184 292 SMART sant 4 56 IPR001005 -
Apr7g1184 292 SMART sant 115 165 IPR001005 -
Apr7g1184 292 Gene3D - 6 53 - -
Apr7g1184 292 ProSiteProfiles Myb-like domain profile. 111 163 IPR001005 -
Apr7g1184 292 PANTHER TRANSCRIPTION FACTOR KUA1 6 280 - -
Apr7g1184 292 PANTHER HOMEODOMAIN-LIKE TRANSCRIPTIONAL REGULATOR-RELATED 6 280 - -
Apr7g1184 292 ProSiteProfiles SANT domain profile. 119 167 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1184 Apr-Chr7 18771865 18779623 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Apr7g1184 Myb_DNA-binding 6.8e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1184 - - ccaj:109792793 511.531