Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1170 ATGGTGATTTCAGATGAGAACAGTTCTAAACCAATCAACCCCACAAATTTTCAAGGAGGGTTAGATTGTGTGGGTAACAGAAAGGTGGGGCAGAACAGAAGGGCTTTGAGCATTATCAATCAGAATCTGGTGGTGGAAGGTCGACCTTACCCTTGCGTTGTTAACAAGAGAACTTTGTCAGAAAAACATGAAGTTTGTGAAAAGAAGCAGGCGGATCCGGTGCATCGACCCATCACAAGGAGGTTTGCTGCACAAATTGCCAGCACACAGCAATGTCGTGCTGAGGAAAGCAAGAGGTCAAACATGTCAAATTCAAATTCGAATGGATTTGGGGAGTGTATATTTATCGATGATGAACACAAGCCAACTGAAGACCAGCCAGTGCCTATGGCTTTAGAGCAAACAGAACCAATGCATAATGAATCAGATCAGATGGAGGAGGTTGAGATGGAGGATATAATTGAAGAGTCTGTTTTGGACATTGATATCTGTGATGCAAACAATCCTTTCGCAGTAGTGGACTATATTGAAGATCTTTATTCCTACTACAGAAAAATGGAGAGTACTAGCTGTGTCTCACCGAATTATATGGTACAACAATTTGACATCAATGAAAGAATGAGGGCTATACTGATTGACTGGCTTATTGAGGTGCACGACAAATTTGACCTCATGCACGAGACGTTGTTTCTTACAGTAAATCTAATAGATAGATTTTTGGCAAAGCAGAGTGTGGTAAGAAAGAAGCTTCAGTTGGTTGGCCTAGTTGCCATGCTTTTAGCATGCAAATATGAGGAAGTTTCAGTGCCTGTGGTGGGGGATCTAATCCTTATATCAGACAAAGCATACACAAGGAAGGAAGTTCTGGAAATGGAGAAGTTGATGGTCAATACATTGCAGTTTAACATGTCTGTGCCAACAGCATATGTTTTTATAAAAAGGTTCCTAAAGGCAGCTCAAGCAGACAGAAAACTTGAGCTACTTGCTTTCTTCTTGGTAGAGCTATCTCTAGTAGAATATGAGATGTTGAAGTTTCCTCCATCAATGCTAGCAGCAGCTGCTGTCTACACAGCTCAATGCACTATTTATGGTTTCAAACAATGGAGTAAGACATGTGAATGGCACACCAACTACTCAGAAGATCAGCTATTAGAGTGCTCAAGTTTAATGGTTGATTTTCACAAGAGAGCTGGGACAGGGAAACTTACAGGGGTACATAGGAAGTATTGCTCATCAAAATTTAGCTACACTGCAAGATGTGAACCAGCAAGTTTTCTTCTGGAGAACCCATTGTAG 1296 0.4113 MVISDENSSKPINPTNFQGGLDCVGNRKVGQNRRALSIINQNLVVEGRPYPCVVNKRTLSEKHEVCEKKQADPVHRPITRRFAAQIASTQQCRAEESKRSNMSNSNSNGFGECIFIDDEHKPTEDQPVPMALEQTEPMHNESDQMEEVEMEDIIEESVLDIDICDANNPFAVVDYIEDLYSYYRKMESTSCVSPNYMVQQFDINERMRAILIDWLIEVHDKFDLMHETLFLTVNLIDRFLAKQSVVRKKLQLVGLVAMLLACKYEEVSVPVVGDLILISDKAYTRKEVLEMEKLMVNTLQFNMSVPTAYVFIKRFLKAAQADRKLELLAFFLVELSLVEYEMLKFPPSMLAAAAVYTAQCTIYGFKQWSKTCEWHTNYSEDQLLECSSLMVDFHKRAGTGKLTGVHRKYCSSKFSYTARCEPASFLLENPL* 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1170 431 Pfam Cyclin, C-terminal domain 306 420 IPR004367 -
Apr7g1170 431 CDD CYCLIN 207 296 IPR013763 -
Apr7g1170 431 PIRSF Cyclin_A_B_D_E 24 431 IPR039361 -
Apr7g1170 431 Gene3D - 192 304 - -
Apr7g1170 431 PANTHER CYCLINS 22 426 IPR039361 -
Apr7g1170 431 Gene3D - 178 417 - -
Apr7g1170 431 CDD CYCLIN 304 391 IPR013763 -
Apr7g1170 431 SUPERFAMILY Cyclin-like 167 303 IPR036915 -
Apr7g1170 431 SMART Cyclin_C_2 306 423 IPR004367 -
Apr7g1170 431 ProSitePatterns Cyclins signature. 208 239 IPR006671 -
Apr7g1170 431 SMART cyclin_7 310 392 IPR013763 -
Apr7g1170 431 SMART cyclin_7 213 297 IPR013763 -
Apr7g1170 431 SUPERFAMILY Cyclin-like 305 423 IPR036915 -
Apr7g1170 431 Pfam Cyclin, N-terminal domain 178 304 IPR006671 -
Apr7g1170 431 PANTHER CYCLIN-B2-1 22 426 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1170 Apr-Chr7 18593477 18596598 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1170 1 427 Core Cell Cycle Gene Families AT1G20610 60.230 0.0 510
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1170 K21777 - gmx:100798068 769.615