Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1165 ATGAATAATGAGGATGGGGAAGTGGTGGAAGCAGTGAATGGGGATAAGAAAGTACCTAATATAACGATAAAGGTAGTGAGAGAAAAGGGTTCGACAAAATCTTCGTCTTCTTCAAGCTTCAGTTTTTGTCGTTCTGATGAATGTGGGGTGGACTTGAGCATGGCCAAGAATTACAATAGGCGACACAAGGTTTGTGAACGACATGCTAAGGCTCCTGTCGTTTTAGTGTCTAGCATTCGTCAGAGGTTCTGCCAACAATGTAGCAAGTTCCATGAACTTGCGGAGTTTGATAACAAAAAAAGAAGTTGTAGGGCAAGATTGGCTGGTCATAATGAACGTAGAAGGAAAACACAGACAGATCAATCCTCAGGTGGTGACCATTAG 384 0.4245 MNNEDGEVVEAVNGDKKVPNITIKVVREKGSTKSSSSSSFSFCRSDECGVDLSMAKNYNRRHKVCERHAKAPVVLVSSIRQRFCQQCSKFHELAEFDNKKRSCRARLAGHNERRRKTQTDQSSGGDH* 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1165 127 SUPERFAMILY SBT domain 42 121 IPR036893 GO:0003677|GO:0005634
Apr7g1165 127 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 13 125 IPR044817 GO:0003677
Apr7g1165 127 MobiDBLite consensus disorder prediction 112 127 - -
Apr7g1165 127 MobiDBLite consensus disorder prediction 106 127 - -
Apr7g1165 127 Pfam SBP domain 43 116 IPR004333 GO:0003677
Apr7g1165 127 ProSiteProfiles Zinc finger SBP-type profile. 40 117 IPR004333 GO:0003677
Apr7g1165 127 Gene3D - 33 104 IPR036893 GO:0003677|GO:0005634
Apr7g1165 127 PANTHER - 13 125 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1165 Apr-Chr7 18533159 18534238 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1165 33 120 SBP-box Gene Family AT2G33810 61.364 3.35e-35 116
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Apr7g1165 SBP 5.7e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1165 - - gmx:100820357 168.318
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1165 7 18533159 18534238 Apr7g1165 7 18533159 18534238 ECH