Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1131 ATGGATTTTGTGCCAAATCCGTGTCCTTTGCGTTCATTTGCGTTTGGGAATCTCCTTGAGAGGGTTAAGCAGCTTGGCACCCTCGCCGTTTCTGTTGTCATTGGCAACATCTTCTCCGCGATCTTGACTTTCTGCTTTGCATTTGTGGGCACTTTGTTGGGGGCTTTGACAGGAGCTTTGATAGGCCAAGAAACTGAGAGTGGCTTCATTCGAGGTGCTGCTGTTGGTGCCATATCAGGAGCTGTTTTTTCCATTGAGGTGTTTGAATCCTCTCTTGTTCTTTGGCAATCTGATGAATCTGGGATTGGGTGTCTCTTATATTTGATTGATGTTATTGCTAGCTTACTGAGTGGGAGACTTGTGCGCGAGAGGATTGGTCCAGCCATGTTGAGTGCTGTCCAAAGTCAGATGGGTGCTGTTGAAACCAGCTTTGATGAGGTTCAAAACATCTTTGACACTGGTGGTGCCAAAGGTTTGTCTGGAGATTTGGTTGAAAAAATCCCAAAGACCAAAATTACGAAGGACAACAATGTTGATGCTTCCGGTGATAGGGTTTCTTGTTCAGTTTGCCTGCAGGACTTTCAGCTTGAGGAGACAGTTAGAAGCTTACCTCATTGCCATCACATGTTTCACTTACCTTGCATAGATAAGTGGCTCTTCAGGCATGGTTCTTGCCCATTATGCAGAAGGGATCTGTAA 699 0.4549 MDFVPNPCPLRSFAFGNLLERVKQLGTLAVSVVIGNIFSAILTFCFAFVGTLLGALTGALIGQETESGFIRGAAVGAISGAVFSIEVFESSLVLWQSDESGIGCLLYLIDVIASLLSGRLVRERIGPAMLSAVQSQMGAVETSFDEVQNIFDTGGAKGLSGDLVEKIPKTKITKDNNVDASGDRVSCSVCLQDFQLEETVRSLPHCHHMFHLPCIDKWLFRHGSCPLCRRDL* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1131 232 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 232 IPR013083 -
Apr7g1131 232 Pfam Ring finger domain 186 229 IPR001841 -
Apr7g1131 232 PANTHER NEP1-INTERACTING PROTEIN-LIKE 1 10 232 - -
Apr7g1131 232 CDD RING-H2_PA-TM-RING 187 229 - -
Apr7g1131 232 SMART ring_2 187 228 IPR001841 -
Apr7g1131 232 ProSiteProfiles Zinc finger RING-type profile. 187 229 IPR001841 -
Apr7g1131 232 SUPERFAMILY RING/U-box 186 232 - -
Apr7g1131 232 PANTHER NEP1-INTERACTING PROTEIN-LIKE 2 10 232 IPR044523 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1131 Apr-Chr7 18272013 18274073 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1131 17 232 C3H Transcription Factor Family AT5G66070 76.852 4.60e-117 331
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1131 - - gmx:100807641 424.476
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1131 7 18272013 18274073 Apr3g0387 3 7613332 7614945 PCT