Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1114 ATGGCAGAAAACAACGACGAAACATGTTCTGAAACTTCACCACCCTCAAACAGGTGCACATACTTGTTTCATAGATTATGCGGTTCCTGGAACAAAAACACCGCACCAACATGCCCAAGTCGAAAAATGTTTCATAGGGACGTCGAAAAAGAAGAATTTCAGTATGCCAGTAGCCACTGTCTCTCATCCTACTACAGTGTCTTCGTTGTTCGACTAGCAATCATGGTCATGCTAGCAATCTTGATAGGGCTGCTCACAATATTGACATGGCATTTCACAAAGATTTATACAACGAAATCACTTAAAAGTTTGGCATATGGTTTGCGTTATGAACTTTTGCAAAGACCTGTTTTGAGAATGTGGAACATTTTAAACTCTACTTCCGAAATTACAACAGCTCAGGTCAAATTGTCTCAGTATGTGATCAAACGTTACAGCAACCCTGCGACTCAAGCAGAGCAAGTTGAGCTTTATGAAGCAATGAGGGCTGTAACATGGGCATTGTTTGTTAGTCGAAAAGCTCTCAACTCAATAACTATCAATTATAAGAATGGATTTGTCCAAGCATTCCATAGAGATCTGAAGGATAACAACACATTTTACATTTACTCTGATCTTGCAAATTACTCCATGGGTGCCAGCAACTCTAATGAGATCAATTCCTTTTCAACACACCAAGCTTGGGATGACAAAGCCATCCATGGTAACTATTCTGCAATTTGGTATCGTGAACCACTTGACCCTATTAGTGGTGAAAAGATTGGAAAAGCTATGCAAATTGCACCCGAAGACTTGATCAATATAGCTGGCCTTTCCCAGGTACCTGATGGTGTAGCTTCATGGCATGTTGCGGTGAGCAAGTTTACAGATTCACCATTACTTTCAGCAGCATTACCAGTTTGGGACTCTTCTAATAAGACTATTATGGCTGTTGTGGGTGTCACAACTGCACTCTATAGTGTAGGACAACTAATGAGAGAACTCGTTGAACTGCATAGTGGCCATATGTATTTGACTTCTCAAGAGGGTTATTTACTTGCAACTTCCACAAGTGCACCTCTATTAACAAATTCAACAAAGCCACCTAAGCTTAAGATGGCTGTTGATTGTGAAGATGATATAATACGACAAGGAGCTGAATGGTTACAAAGAACTTATGGGAACAATTTTCCTCCAAGTCATGAGGTTCATGTAGAGAATGTTAAGCTAGGCCATCAGGAATATTACATTGACTCTTTCTTCCTAAATTTGAAAAGACTTCCTTTGGTCGGTGTAATCGTTATACCAAGAAGGTATATCATGGGGCAAGTAGATGAAAGAGCCTTCAAAACATTGGTTATTTTGATATCTGCATCATTGTGTATTTTAGTTATTGGATGTGTTTGCATTTTGATTTTGACAAATGGAGTATCAAAGGAAATGAATCTAAGAGCAGAACTAATAAATCAATTGGAAGCAAGAAGAAAGGCAGAGGCATCAAGCAATTACAAAAGTCAATTCCTTGCAAACATGAGTCATGAATTGAGGACACCTATGGCAGCAGTAATTGGGTTGCTTGACATTCTTATATCTGATGATTGTCTCACAAATGAACAATATTCAACAGTTACTCAAATAAGAAAATGCTCAACTGCTCTGCTCCGTCTTCTTAACAATATCTTGGACCTGAGTAAGGTGGAATCTGGAAAATTGGTCTTAGAAGATGCAGAATTTGATTTGGCACGGGAACTTGAAGGGCTAGTAGATATGTTTTCTGTTCAGTGCATTAACCACAATGTAGAGACTGTTTTAGACCTGACTGATGACATGCCAAAGGTAGTTCGGGGTGATTCTGCGAGGGTAGTGCAAATATTTGCCAATTTGATCAACAATTCAATTAAGTTTACTCCATCGGGTCATGTTATTCTCCGAGGATGGTGTGAAAATCCAAATCCTTCTTTTGTTTCTCCAAATCGTCCTTTAGACCAGAAGAAATCACGAAATTTACAAAAGAGCAAAGAGAAGCCAAATGCAAATCATTCAAAGAAAACATCAATGAAAGATAACAAAGTGATACTTTGGTTTGAAGTTGATGACACAGGCTGTGGTATTGATCCAAGCAAATGGGATTCTGTGTTTGAAAGCTTTGAGCAAGCTGATCCGTCAACCACAAGATTGCATGGAGGAACTGGTCTTGGTCTTTGCATTGTTAGGAACTTGGTGAACAAGATGGGTGGAGACATTAAGGTTGTCAAAAAGGAGGGCCCAGGAACACTAATGCGATTATGCTTGCTTCTTAGTGCACCAACGGATGTCACGGAACAACATTGTGCAATAAACTTGAAATGCAATGGCTTAGTGGTACTACTTGCACTACATGGCAAAATGAGTCGATTGATTACATCTAAGTGGTTACAGAAAAATGGACTGTGCACAATGGAAGCATCTGAATGGAACGGACTAACTCAAATTTTGGGGGAACTCTTTCATGCAAGAAGTTCAATCCACAATAATGACTTTGATACACACTATCCAACAAATGAAGAATTGAAGTCTAAACTCCTCAATATACGAGATATGAGGAACCCAACTTTTGTCATTATTGTTGACATTGGGCTACTTGACTTAAGCACAGATATATGGAAGGAACAACTTAACTTCCTTCATAGGCACTTTGGTAGGGCAAAGTTCGTATGGCTACTAAATCATGACACCTCCAATACCATAAAGATGGAGCTCCGCAATAAAGGCCATATGCTGATGGTCAACAAACCCCTTTACAAAGCAAAAATGATTCATATTTTGGAAACTGTCATAAAGGAGAGAAATCTTGAGCTACAAAAGAAAGACATGACTACTCTAAGGACCACAATGAAAGAGGGTGATTTGCATGAGTTTCTTGATATTGATTCTACTCATTTTGATGCTGCAAGTTCTGATGATTCTGACATATCTGAAATAGGTGGTTCTAATCCTGTTAGTGCTAATGGAGATAAATCAAGTAAAGTGGTAGCCAAATCCCATCCATCATCACCATGCCAGATGAATAATTTTCCAGTTAGATTAACTGATAAAAATGAAGATTCTAAAAATGGAGAAACACACAAGGTCACTAACCCAAGTAAAGCAGTAGATGGAAAGAAATCTCTTGAGGGCCTAAGGATTTTGCTTGCAGAAGATACGCCAGTACTTCAAAAGGTTGCAACCATAATGCTTGAAAAAATGGGAGCTGTTGTTGTTGCTGTAGGTGATGGACAACAGGCAGTAGATGCTCTCAATTGCATGCTCAATGCTGAAGATTGTAGCAGAGAATCTTTCCAGAAGGAAAGAAACACAAGATCTCAAACAAAGATTTTGACTTACCATCCATATGACTTAATCCTAATGGATTGTCAGATGCCGAAGATGGATGGTTATGAGGCAACAAAAGCAATTAGGAAATCAGAAGCGGGAACAAACTATCACATTCCTATTGTTGCTCTTACAGCACATGCAATGTCATGTGATGAAGCCAAATGCTTGGAGGTGGGCATGGATGCTTACTTAACAAAGCCGATTGACTTCAAGATGATGGTGTCCACCATTCTTTCACTTACCAAGAGAGCATCTTGA 3591 0.391 MAENNDETCSETSPPSNRCTYLFHRLCGSWNKNTAPTCPSRKMFHRDVEKEEFQYASSHCLSSYYSVFVVRLAIMVMLAILIGLLTILTWHFTKIYTTKSLKSLAYGLRYELLQRPVLRMWNILNSTSEITTAQVKLSQYVIKRYSNPATQAEQVELYEAMRAVTWALFVSRKALNSITINYKNGFVQAFHRDLKDNNTFYIYSDLANYSMGASNSNEINSFSTHQAWDDKAIHGNYSAIWYREPLDPISGEKIGKAMQIAPEDLINIAGLSQVPDGVASWHVAVSKFTDSPLLSAALPVWDSSNKTIMAVVGVTTALYSVGQLMRELVELHSGHMYLTSQEGYLLATSTSAPLLTNSTKPPKLKMAVDCEDDIIRQGAEWLQRTYGNNFPPSHEVHVENVKLGHQEYYIDSFFLNLKRLPLVGVIVIPRRYIMGQVDERAFKTLVILISASLCILVIGCVCILILTNGVSKEMNLRAELINQLEARRKAEASSNYKSQFLANMSHELRTPMAAVIGLLDILISDDCLTNEQYSTVTQIRKCSTALLRLLNNILDLSKVESGKLVLEDAEFDLARELEGLVDMFSVQCINHNVETVLDLTDDMPKVVRGDSARVVQIFANLINNSIKFTPSGHVILRGWCENPNPSFVSPNRPLDQKKSRNLQKSKEKPNANHSKKTSMKDNKVILWFEVDDTGCGIDPSKWDSVFESFEQADPSTTRLHGGTGLGLCIVRNLVNKMGGDIKVVKKEGPGTLMRLCLLLSAPTDVTEQHCAINLKCNGLVVLLALHGKMSRLITSKWLQKNGLCTMEASEWNGLTQILGELFHARSSIHNNDFDTHYPTNEELKSKLLNIRDMRNPTFVIIVDIGLLDLSTDIWKEQLNFLHRHFGRAKFVWLLNHDTSNTIKMELRNKGHMLMVNKPLYKAKMIHILETVIKERNLELQKKDMTTLRTTMKEGDLHEFLDIDSTHFDAASSDDSDISEIGGSNPVSANGDKSSKVVAKSHPSSPCQMNNFPVRLTDKNEDSKNGETHKVTNPSKAVDGKKSLEGLRILLAEDTPVLQKVATIMLEKMGAVVVAVGDGQQAVDALNCMLNAEDCSRESFQKERNTRSQTKILTYHPYDLILMDCQMPKMDGYEATKAIRKSEAGTNYHIPIVALTAHAMSCDEAKCLEVGMDAYLTKPIDFKMMVSTILSLTKRAS* 1197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1114 1196 PANTHER TWO-COMPONENT HISTIDINE KINASE 1026 1193 - -
Apr7g1114 1196 PANTHER TWO-COMPONENT HISTIDINE KINASE 18 1023 - -
Apr7g1114 1196 SUPERFAMILY CheY-like 1044 1193 IPR011006 -
Apr7g1114 1196 CDD REC_hyHK_CKI1_RcsC-like 1048 1188 - -
Apr7g1114 1196 Pfam His Kinase A (phospho-acceptor) domain 497 562 IPR003661 GO:0000155|GO:0007165
Apr7g1114 1196 ProSiteProfiles Response regulatory domain profile. 1047 1192 IPR001789 GO:0000160
Apr7g1114 1196 ProSiteProfiles Histidine kinase domain profile. 503 761 IPR005467 -
Apr7g1114 1196 SMART HKATPase_4 609 761 IPR003594 -
Apr7g1114 1196 MobiDBLite consensus disorder prediction 976 1012 - -
Apr7g1114 1196 SMART HisKA_10 496 562 IPR003661 GO:0000155|GO:0007165
Apr7g1114 1196 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 484 563 IPR036097 GO:0000155|GO:0007165
Apr7g1114 1196 Gene3D - 484 563 - -
Apr7g1114 1196 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 609 759 IPR003594 -
Apr7g1114 1196 MobiDBLite consensus disorder prediction 972 1012 - -
Apr7g1114 1196 Pfam Response regulator receiver domain 1048 1187 IPR001789 GO:0000160
Apr7g1114 1196 PRINTS Bacterial sensor protein C-terminal signature 686 700 IPR004358 GO:0016310|GO:0016772
Apr7g1114 1196 PRINTS Bacterial sensor protein C-terminal signature 704 714 IPR004358 GO:0016310|GO:0016772
Apr7g1114 1196 PRINTS Bacterial sensor protein C-terminal signature 721 739 IPR004358 GO:0016310|GO:0016772
Apr7g1114 1196 MobiDBLite consensus disorder prediction 647 677 - -
Apr7g1114 1196 PANTHER OSMOSENSOR HISTIDINE KINASE 18 1023 - -
Apr7g1114 1196 PANTHER OSMOSENSOR HISTIDINE KINASE 1026 1193 - -
Apr7g1114 1196 Gene3D - 1024 1194 - -
Apr7g1114 1196 Gene3D - 564 762 IPR036890 -
Apr7g1114 1196 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 551 757 IPR036890 -
Apr7g1114 1196 MobiDBLite consensus disorder prediction 657 677 - -
Apr7g1114 1196 CDD HisKA 497 558 IPR003661 GO:0000155|GO:0007165
Apr7g1114 1196 SMART REC_2 1046 1188 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1114 Apr-Chr7 18113790 18122443 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1114 30 1193 Histidine Kinase Gene Family AT2G17820 67.173 0.0 1580
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Apr7g1114 HATPase_c 4.2e-22 CL0025
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1114 - - gmx:100807543 2047.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1114 7 18113790 18122443 Apr7g1114 7 18113790 18122443 ECH
Apr7g1114 7 18113790 18122443 Apr3g0365 3 7264019 7271659 PCT