Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1109 ATGTTTCCTCGTTGGTCGGCGCTTCTTCTTGTTCTTCTTTTTGTCTTGTGTAGCTCAGGAGCAAAGGTTGTCACAATTGATGTAAACGCAGCCAAGGCTCTCATTCACACTGGCTCAGTTTATCTTGATGTTAGGACGGTGGAAGAGTTCGAGAAGGGGCATGTGGATGCAGTTAATGTCCTTAACATTCCATACATGTTGGATACACCAAAGGGCAGGGTGAAGAACCCGAACTTTCTTAAGGAGGTTTCATCGGCTTGCAACAAAGAAGATCACCTCATTGTGGGTTGTCAAAGTGGGGTGAGATCTCTGTATGCAACTACTGATCTTCTAGCTGATGGTTTTAAGAATGTGAATGACATGGGAGGAGGTTATATGGGCTGGGTTAAAAACAAGTTGCCAGTGAAGACCCTATTACCTAAAGAGGAGCTATAA 435 0.4414 MFPRWSALLLVLLFVLCSSGAKVVTIDVNAAKALIHTGSVYLDVRTVEEFEKGHVDAVNVLNIPYMLDTPKGRVKNPNFLKEVSSACNKEDHLIVGCQSGVRSLYATTDLLADGFKNVNDMGGGYMGWVKNKLPVKTLLPKEEL* 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1109 144 ProSiteProfiles Rhodanese domain profile. 40 137 IPR001763 -
Apr7g1109 144 Gene3D - 15 137 IPR036873 -
Apr7g1109 144 CDD RHOD 31 129 - -
Apr7g1109 144 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 22 135 IPR036873 -
Apr7g1109 144 Pfam Rhodanese-like domain 31 130 IPR001763 -
Apr7g1109 144 PANTHER THIOSULFATE SULFURTRANSFERASE 18 6 139 IPR044684 GO:0003824
Apr7g1109 144 SMART rhod_4 26 134 IPR001763 -
Apr7g1109 144 PANTHER THIOSULFATE SULFURTRANSFERASE 18 6 139 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1109 Apr-Chr7 18072498 18073719 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1109 22 137 Sulfurtransferasese or Rhodanese AT5G66170 55.172 1.47e-47 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1109 - K15692 gmx:100815122 236.113
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1109 7 18072498 18073719 Apr7g1109 7 18072498 18073719 ECH
Apr7g1109 7 18072498 18073719 Apr3g0361 3 7198217 7199876 PCT