Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1099 ATGCTTTCCTCCGTCTCCTTTCCGGCTTCTCTTCCCTCCCCAAATCTTACCGGCAGCGCCTTGGCCTCACAGCCACGTCGCGTCAGATCCCGACCAATAGTCGCCTTTGCCACCGCTACAGCCACCGCCGAAGCTCGCTCTTCTTGGACGGAGCAACCGAGGCCTTCGTATCTGAGCTCTTCTTGCTCATCGCTCTACGAGGTTCTAGGCATCCCCGCCGGCGCCTCCAACCAGGAAATCAAGGCGGCGTACCGGCGATTGGCCAGAGTTTGCCACCCGGACGTGGCAGCGATTGACCGTAAAAACTCGTCGGCGGACGAGTTCATGAAGATTCACGCCGCGTACTCCACCCTCTCGGATCCCGACAAGCGCGCCACATACGATCAGAGCCTATTCCGGCGACGACAGCCGTTGTCGGCTTCTATGTTTTCCGGTTACACCAGTCGGAACTGGGAAACGGATCAGTGCTGGTAG 474 0.5928 MLSSVSFPASLPSPNLTGSALASQPRRVRSRPIVAFATATATAEARSSWTEQPRPSYLSSSCSSLYEVLGIPAGASNQEIKAAYRRLARVCHPDVAAIDRKNSSADEFMKIHAAYSTLSDPDKRATYDQSLFRRRQPLSASMFSGYTSRNWETDQCW* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1099 157 MobiDBLite consensus disorder prediction 1 24 - -
Apr7g1099 157 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Apr7g1099 157 Gene3D DnaJ domain 55 150 IPR036869 -
Apr7g1099 157 ProSiteProfiles dnaJ domain profile. 64 131 IPR001623 -
Apr7g1099 157 Pfam DnaJ domain 65 128 IPR001623 -
Apr7g1099 157 SUPERFAMILY Chaperone J-domain 61 134 IPR036869 -
Apr7g1099 157 PANTHER - 1 157 - -
Apr7g1099 157 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 157 - -
Apr7g1099 157 CDD DnaJ 67 120 IPR001623 -
Apr7g1099 157 SMART dnaj_3 63 123 IPR001623 -
Apr7g1099 157 PRINTS DnaJ domain signature 66 84 IPR001623 -
Apr7g1099 157 PRINTS DnaJ domain signature 84 99 IPR001623 -
Apr7g1099 157 PRINTS DnaJ domain signature 103 123 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1099 Apr-Chr7 17985579 17986735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1099 66 128 C2H2 Transcription Factor Family AT1G74250 44.776 1.46e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1099 - - gmx:100800959 248.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1099 7 17985579 17986735 Apr7g1099 7 17985579 17986735 ECH
Apr3g0351 3 6945557 6946042 Apr7g1099 7 17985579 17986735 ECH