Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1091 ATGGAACCCCAACAACAACAGAACCAACAACAACACTCACCAAACGAGGATGGTGGCAGTGGAAAAGGGGGGTTTCTGAGCAGGCAAAGTAGTACACGGTGGACTCCCACAACCGATCAGATAAGAATATTGAAGGACCTTTACTATAACAATGGAATTAGATCCCCAAGTGCAGAACAGATTCAGAGGATCTCTGCTAGGCTGAGGCAGTACGGTAAGATTGAAGGCAAAAATGTCTTTTATTGGTTCCAAAACCACAAAGCTCGAGAAAGGCAAAAGAAAAGGTTCACTTCTGATAATGTGCCCATGCAAAGAGCAACAACTAATGCTGTTGCTTGGAAACCTGAAGAACCCATTCACACCAAGTATTGTAACATACCATCTACAGGGATCTCTTCGGCATCATCTTCTTCTGCTGAGATGGTTACTGTGGGACAGATGGGGAATTATGGGTATGGAACCGTGCCCATGGAAAAGAGTTTTAGGGACTGCACAATATCAGCTGGGGGCAGCAGTACTGGTCATGTTGGACACAACATGGGATGGGTCGGTGTGGACCCATATTCCTCAGCCTACGCCAATTTCTTTGACAAAATAAGGCCAACTGAAGAAACCATGGAAGAAGAACAAGAAGAAGATGGTGCTACTGAGATTGAAACCCTCCCTTTATTCCCTATGCACGGTGAGGACATCCATGGCTATTGCAACCTCAAGTCTAATTCTTCTAACTATGATGGAAGCAGTTGGCATCATTCTGAAGATGGGTTCAAGAATGGTTCTCGTGCTTCCTTGGAGCTCAGTCTCAACTCTTATACCCGCAGATCTCCAGATTTCGCTTGA 840 0.4524 MEPQQQQNQQQHSPNEDGGSGKGGFLSRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDNVPMQRATTNAVAWKPEEPIHTKYCNIPSTGISSASSSSAEMVTVGQMGNYGYGTVPMEKSFRDCTISAGGSSTGHVGHNMGWVGVDPYSSAYANFFDKIRPTEETMEEEQEEDGATEIETLPLFPMHGEDIHGYCNLKSNSSNYDGSSWHHSEDGFKNGSRASLELSLNSYTRRSPDFA* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1091 279 Pfam Homeodomain 31 92 IPR001356 GO:0003677
Apr7g1091 279 SUPERFAMILY Homeodomain-like 25 99 IPR009057 -
Apr7g1091 279 PANTHER PROTEIN WUSCHEL 1 272 - -
Apr7g1091 279 MobiDBLite consensus disorder prediction 1 37 - -
Apr7g1091 279 ProSiteProfiles 'Homeobox' domain profile. 27 93 IPR001356 GO:0003677
Apr7g1091 279 CDD homeodomain 32 94 IPR001356 GO:0003677
Apr7g1091 279 MobiDBLite consensus disorder prediction 1 17 - -
Apr7g1091 279 Gene3D - 26 92 - -
Apr7g1091 279 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 272 IPR044555 GO:0003700|GO:0099402
Apr7g1091 279 SMART HOX_1 29 97 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1091 Apr-Chr7 17893727 17895357 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1091 25 269 Wox Gene Family AT2G17950 43.299 1.36e-54 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Apr7g1091 Homeodomain 1.6e-17 CL0123