Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1084 ATGATGGAGTCGATGGAGTCATGTGTCCCACCGGGTTTTCGGTTCCACCCTACAGATGAAGAACTTGTTGGTTATTATCTGAGGAAGAAAGTAGCTTCTCAGAAAATTGACCTTGACGTTATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTCCAAGAGAGATGCAGGATCGGGTATGAGGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAGAAGTATCCAACTGGGACAAGAACTAACAGAGCTACCATGGCTGGGTTTTGGAAAGCGACAGGAAGAGACAAAGCAGTGTATGACAAGGCAAAACTAATTGGGATGAGGAAGACCCTCGTTTTCTACAAAGGAAGAGCCCCTAATGGACAGAAAACAGACTGGATCATGCACGAGTATAGGCTTGAATCTGATGAGAATGGACCTCCACAGGAAGAAGGATGGGTTGTGTGCAGAGCATTCAAGAAAAGAACCAATGGGCAAACGAAGACTATTGAAGGATGGGATACAAGCTACTTCTATGATGAAGCAAGTGGAGTGAGCACTGTGGTCGATCCAATTGATCTCATCTCAAGGCAACCTCAGAGCTTTTTATCTCAAAATTTCTTGTGCAAGCAAGAGATAGAAGCAGATAACTTGAGCTGCATGCACCCAGATCAATTTGTACAACTACCTCAGCTAGAAAGCCCGTCTTTGCCATTGATAAAGAGGCCAAGCACAATGTCCCTTGTATCAGACAACAACGAAGAAGATGATACTCAAAACATGTTAATCAACAACACCACAAAGAAAGTCACTGATTGGAGAGCTCTTGACAAGTTTGTGGCTTCTCAACTGAGTCAGGAAGACAGGCATGAAACTAATGCTCTATCAAGCTTTGAAACCCATAATAACAACCCGGACATGGCATTGCTGCTACTGCAGAATAGTAGGGATGAAGGGAACAAGTTAAGCCCGTTTTTTAATACAAGCTCAGACTGTGATATTGGGATATGCGTATTTGAAAAATGA 1017 0.4297 MMESMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLQERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKAVYDKAKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLESDENGPPQEEGWVVCRAFKKRTNGQTKTIEGWDTSYFYDEASGVSTVVDPIDLISRQPQSFLSQNFLCKQEIEADNLSCMHPDQFVQLPQLESPSLPLIKRPSTMSLVSDNNEEDDTQNMLINNTTKKVTDWRALDKFVASQLSQEDRHETNALSSFETHNNNPDMALLLLQNSRDEGNKLSPFFNTSSDCDIGICVFEK* 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1084 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 318 - -
Apr7g1084 338 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Apr7g1084 338 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Apr7g1084 338 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Apr7g1084 338 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Apr7g1084 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 5 318 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1084 Apr-Chr7 17821125 17825382 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1084 2 337 NAC Transcription Factor Family AT2G18060 65.217 5.31e-167 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Apr7g1084 NAM 2.6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1084 - - aprc:113869508 697.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1084 7 17821125 17825382 Apr7g1084 7 17821125 17825382 ECH
Apr7g1084 7 17821125 17825382 Apr3g0329 3 6582797 6586125 PCT