Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1074 ATGTCGAACCTCGAACTTGAACCCTTCCACATGGCCATCTTAGCCATCATCCCTCTAATACTTCTCATGGATTTAGCATCTCGTATTCGTAGAAGACCACCATATCCACCAGGCCCGAAAGGGTTACCCATAATCGGGAACATGCTAATGATGGACCAGTTAACCCATCGAGGTCTCGCTAACCTTGCAAAACAATACGGTGGCGTATTCCACCTTCGCATGGGGTTCCTACATATGGTCGCAATCTCAGACCCAGACGCGGCTCGTCAAGTTCTCCAAGCCCAAGACAACATCTTCTCTAACCGACCAGCCACCATAGCCATTAGCTACCTCACTTACGACCGTGCTGACATGGCTTTCGCTCACTATGGCCCTTTTTGGCGCCAGATGCGAAAACTCTGCGTCATGAAGCTCTTCAGCCGCAAGCGTGCTGAGTCATGGCAATCTGTGAGAGACGAAGTCGACGCCGCCGTACGCACCGTCGCGGCCAACACCGGGAAGGGCCTGAACATCGGGGAACTAGTGTTTAACCTCACGAAGAACATAATCTATCGTGCGGCTTTTGGGTCGAGCTCGCAAGAAGGACAAGACGAGTTCATTGGGATATTGCAAGAGTTTTCCAAGTTGTTTGGAGCTTTTAACATCGCTGACTTTATACCTTACCTTGGGTGCGTTGACCCCCAAGGGTTGAACGCTAGGCTCGCTAAGGCGCGTCGTGCACTGGATAGTTTCATAGACAAAATCATCGATGAACATGTGGAGAAGAGGGGTGGTGAGGGTTATGAAGAAAGGGACATGGTGGATGAGTTGTTGGCTTTCTACAGCGAAGAGGCTACGTTGAATAATGAATCCGATGATCTGCAGAATTCCATCAAACTTACTAAGGATAATATCAAAGCTATCATTATGGACGTGATGTTTGGAGGGACGGAAACGGTGGCGTCAGCGATCGAGTGGGCCATGGCAGAACTTATGAGAAGCCCAGAAGATCAAAAGAGGGTCCAACAAGAGTTAGCAGAAGTAGTCGGCCTCGACCGTCGGGTCGAAGAGTCCGATTTCGAGAAACTCACTTACCTCAAATGTGCCCTCAAAGAGACGCTACGCCTCCACCCACCCATCCCACTCCTCCTCCACGAGACGGCGGAGGATGCGACGGTCTCCGGTTACTTCGTCCCGAAGAAGGCGCGCGTGATGATCAACGCGTGGGCCATTGGGAGGGACAAGAATAGCTGGGAGGAACCCGAAACCTTCAAGCCGTCCCGGTTCCTCAAACCGGGTGTGCCCGACTTCAAGGGGAGCAACTTTGAGTTCATTCCATTCGGGTCGGGTCGTAGGTCCTGCCCCGGGATGCAGCTTGGTCTTTACGCGCTTGAGTTGGCGGTGGCTCACCTCCTTCATTGCTTCACGTGGGAGTTACCCGATGGGATGAAACCCAGTGAGATGGACATGGGTGACGTGTTCGGACTCACCGCTCCAATGGCGACCCGACTCGTTGCCGTGCCAACCAAGCGCGTGGTGTGCCCTCTCTATTAG 1533 0.5271 MSNLELEPFHMAILAIIPLILLMDLASRIRRRPPYPPGPKGLPIIGNMLMMDQLTHRGLANLAKQYGGVFHLRMGFLHMVAISDPDAARQVLQAQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDAAVRTVAANTGKGLNIGELVFNLTKNIIYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFIPYLGCVDPQGLNARLAKARRALDSFIDKIIDEHVEKRGGEGYEERDMVDELLAFYSEEATLNNESDDLQNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEDQKRVQQELAEVVGLDRRVEESDFEKLTYLKCALKETLRLHPPIPLLLHETAEDATVSGYFVPKKARVMINAWAIGRDKNSWEEPETFKPSRFLKPGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALELAVAHLLHCFTWELPDGMKPSEMDMGDVFGLTAPMATRLVAVPTKRVVCPLY* 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1074 510 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 PRINTS E-class P450 group I signature 178 196 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 PRINTS E-class P450 group I signature 297 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 PRINTS E-class P450 group I signature 317 343 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 PRINTS E-class P450 group I signature 360 378 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 PRINTS E-class P450 group I signature 400 424 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 Pfam Cytochrome P450 36 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 Gene3D Cytochrome P450 28 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 PRINTS P450 superfamily signature 308 325 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 PRINTS P450 superfamily signature 361 372 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 PRINTS P450 superfamily signature 447 458 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1074 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Apr7g1074 510 PANTHER CYTOCHROME P450 84A1-RELATED 4 510 - -
Apr7g1074 510 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 4 510 - -
Apr7g1074 510 SUPERFAMILY Cytochrome P450 29 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1074 Apr-Chr7 17707789 17711098 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1074 43 509 Monolignol Biosynthesis Gene Families AT4G36220 78.647 0.0 787
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1074 K09755 - gmx:100783430 884.019
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr3g0320 3 6375919 6380455 Apr7g1074 7 17707789 17711098 ECH
Apr7g1074 7 17707789 17711098 Apr7g1074 7 17707789 17711098 ECH
Apr3g0320 3 6375919 6380455 Apr7g1074 7 17707789 17711098 PCT