Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1073 ATGGAGTGCGTGGAGGCAGCGTTGAAGACCAGTTTTAGAAAAGAAATGGGCGTAAAACTGAGCCCCCAAAGCTTCATTGAGGAGTTAAGCGTGCAAAATGAGGCCTCCTGCAATGAGTTTTTCGTGGACGACCTCCTTGACTTCTCGAACGTGGAAGAAGAACCAGAGCAGCAACAACAACAACAACAAAAGGAACAAGATTCTGCAAGTGTTTGTGTCTCCCTTCAACAAGGGAACCAAAGCCACGAAGTTTGTGACTCTTTGAAAAACGACTTCGCCTCCTCTGTGCCCACAAGCGACCTAAGCGTTCCGGCGGATGACGTGGCGGACTTGGAGTGGTTGTCTCATTTCATAGAGGATTCCTTCTCGGAATTCTCTGCGGTCTTCCCCACCGTAACTGAGGTAACCAAAGACCCAGAGCCTGAACCGGTTTTCACATATCCATGTTTCAAAAGCCCGGTTCAGACCAAGGCAAGAAGCAAGCGAACCAGGACCCGTGTTCCGCTTTGGCCACTGGCTTCACCTTCCTTCACGGACTCATCCACCGCAACCACCGCCACCTCCTCCTCCTCCTCTTCCTCCTCCTTCCCCTCCAGTCCCTTGCTTATTTACACCAATTTAGCCCAAACCCTTGACCAAGTTTCCTCCGAGGCAACCCCTCCAGTGAAAAAACCGAAGAAAAAAACATCTTCCGAGAGTGCAACAACCCAGGCGCCACGACGGTGCAGCCATTGCGGTGTGCAGAAAACCCCCCAGTGGCGAACTGGGCCGCTCGGCCCAAAAACGCTTTGCAACGCATGTGGGGTCCGGTACAAGTCGGGTCGGCTTTTACCCGAATATAGGCCCGCTTGTAGCCCCACATTCTCCAGTGAATTGCATTCGAACCACCACCGTAAAGTGCTGGAGATGCGGCGGAAGAAGGAGACAGTGGGTGGGGTTGAGACAGGTTTAGCCCCTACTCCTGTTGTTCCCAGTTTTTGA 981 0.526 MECVEAALKTSFRKEMGVKLSPQSFIEELSVQNEASCNEFFVDDLLDFSNVEEEPEQQQQQQQKEQDSASVCVSLQQGNQSHEVCDSLKNDFASSVPTSDLSVPADDVADLEWLSHFIEDSFSEFSAVFPTVTEVTKDPEPEPVFTYPCFKSPVQTKARSKRTRTRVPLWPLASPSFTDSSTATTATSSSSSSSSFPSSPLLIYTNLAQTLDQVSSEATPPVKKPKKKTSSESATTQAPRRCSHCGVQKTPQWRTGPLGPKTLCNACGVRYKSGRLLPEYRPACSPTFSSELHSNHHRKVLEMRRKKETVGGVETGLAPTPVVPSF* 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1073 326 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 235 298 - -
Apr7g1073 326 ProSitePatterns GATA-type zinc finger domain. 242 267 IPR000679 GO:0006355|GO:0043565
Apr7g1073 326 PANTHER GATA TRANSCRIPTION FACTOR 1 310 - -
Apr7g1073 326 PANTHER GATA TRANSCRIPTION FACTOR 1 310 - -
Apr7g1073 326 MobiDBLite consensus disorder prediction 214 249 - -
Apr7g1073 326 ProSiteProfiles GATA-type zinc finger domain profile. 236 272 IPR000679 GO:0006355|GO:0043565
Apr7g1073 326 CDD ZnF_GATA 241 289 IPR000679 GO:0006355|GO:0043565
Apr7g1073 326 Gene3D - 232 309 IPR013088 GO:0006355|GO:0008270
Apr7g1073 326 PIRSF Txn_fac_GATA_plant 1 320 IPR016679 GO:0003677|GO:0005634|GO:0045893
Apr7g1073 326 SMART GATA_3 236 290 IPR000679 GO:0006355|GO:0043565
Apr7g1073 326 MobiDBLite consensus disorder prediction 177 198 - -
Apr7g1073 326 Pfam GATA zinc finger 242 276 IPR000679 GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1073 Apr-Chr7 17673547 17675022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1073 5 326 C2C2-Gata Transcription Factor Family AT5G66320 48.189 1.44e-76 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-GATA Apr7g1073 GATA 1.7e-16 CL0167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1073 - - aprc:113869559 577.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1073 7 17673547 17675022 Apr7g1073 7 17673547 17675022 ECH