Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1060 ATGGCGGGTTTATTCTCATTAGGCGGTGGAGGAGGGAGAGGGAACAGCAACAGCCAAGAGGATCAGCCGCAGGAAATTCCTCCTCCCGACACCTTATTCTGGTATAACAAAAATGACGATGTTTCCTCTTACCGAGGTTTCGAGCTATGGAACCAACAACACCAGCAGCAACAACAACTCATGTCTCATCCTACTCAACCTCAGCCACGTCCTCTCTTTCCGCAAGATCTTTACTCTGCGTTAGGAGTTGGGCCGAGCAGACCCATCTCCGATGATCATTCGTCGTCCCGATCCGCTTTCATGGTTGGTGGAAGCGGAAGCGGAAGTATTAGCTGTCAAGACTGTGGGAACCAAGCGAAGAAGGATTGCCCTCACATGCGGTGCAGAACATGCTGCAAGAGTCGAGGCTTCGATTGCCAAACCCATGTTAAAAGTACTTGGGTCCCCGCTTCCAAACGCCGTGAGCGACAACAACAACTTACTGCGTTGCAACAACATCATCAACAACAACATCTCGAAGATGTTCCCAGAAGACAGAGAGATCATAACCCAACCTCATCCTCTCTCGCCTGCACTCGTTTGCCTTCAAACCCCTCTCCCTCTTCAGGGTTAGAAGAGGTGAATTTTCCATCTGTGGTGAGGTCTGCTGCGGAGTTCAGATGCGTACGTGTGAGCTCCATGGACGAGGCGGAGGAGGAGTATGCATACTCAACAGCTGTAAACATTGGAGGGCATGTTTTCAAAGGAATTTTGTATGACTACGGTCCAGATAACAGTAACTACATGGGTGCTGGGGACAGTGGTGTTGCTGGTTTGAACCTTGCTGCAGCTGCTCCTACCACTACTGGTGCTGTTGTCACTGGGGCACTTGTTGATCCTTCTTCGTTGTATCCAGCTCCACTTAACACCTTCATGCCTGGTAGTGGTACGCAATTCTTCCCTCACCCACGATCTTGA 957 0.5037 MAGLFSLGGGGGRGNSNSQEDQPQEIPPPDTLFWYNKNDDVSSYRGFELWNQQHQQQQQLMSHPTQPQPRPLFPQDLYSALGVGPSRPISDDHSSSRSAFMVGGSGSGSISCQDCGNQAKKDCPHMRCRTCCKSRGFDCQTHVKSTWVPASKRRERQQQLTALQQHHQQQHLEDVPRRQRDHNPTSSSLACTRLPSNPSPSSGLEEVNFPSVVRSAAEFRCVRVSSMDEAEEEYAYSTAVNIGGHVFKGILYDYGPDNSNYMGAGDSGVAGLNLAAAAPTTTGAVVTGALVDPSSLYPAPLNTFMPGSGTQFFPHPRS* 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1060 318 MobiDBLite consensus disorder prediction 89 103 - -
Apr7g1060 318 MobiDBLite consensus disorder prediction 182 206 - -
Apr7g1060 318 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 111 153 IPR006510 -
Apr7g1060 318 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 318 IPR007818 GO:0003700|GO:0006355
Apr7g1060 318 Pfam Domain of unknown function (DUF702) 109 257 - -
Apr7g1060 318 MobiDBLite consensus disorder prediction 1 33 - -
Apr7g1060 318 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 209 256 IPR006511 -
Apr7g1060 318 MobiDBLite consensus disorder prediction 52 103 - -
Apr7g1060 318 MobiDBLite consensus disorder prediction 52 66 - -
Apr7g1060 318 MobiDBLite consensus disorder prediction 11 25 - -
Apr7g1060 318 PANTHER TRANSCRIPTION FACTOR STY-LRP1 FAMILY-RELATED 1 318 - -
Apr7g1060 318 MobiDBLite consensus disorder prediction 150 169 - -
Apr7g1060 318 MobiDBLite consensus disorder prediction 150 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1060 Apr-Chr7 17567469 17570281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1060 1 318 C2H2 Transcription Factor Family AT3G51060 44.764 5.28e-82 251
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Apr7g1060 DUF702 1.8e-64 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1060 - - gmx:100797973 425.631