Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1042 ATGGAGCAGTCATCCCCAGATAACCGATTTTCTCATACTCCAAATTCTACATTCTCAACCAAGAAAGGAAGGAGTGGTTATGAACCATCAGACACAGAGACCGAGTGGCAAGAGATTCCACGGCACGAACGAGAAAGAAGGAACTTAATTTTAGGTCCTGAAGAAACAAAAGCTTTGACTCTAATGAACAAAACCCCCATGGCACTACACAGGAGGTACTCTACAAGGTTTGAAACTGAAGTCTCAATCTCATCATCCTCAACAGCTTCAGTTTCCCGAAGAAAACACCATAGCAAATCACCCTATAAGCTGCGCGTAGCAGGTGATGATGCTGCTTCATCATCATCCATAACCGTGTCTCCTTTCAGCAGAAGCCACGAGCAAAGAACACCCTCTAGAGAGAACAGAAAAGTGGTTGAGGCAACCGAGAAGCCACACTACAAAAGAGCAGTGACTGCTCCAAGGTTGAGGGAGCACGAGAGCAATCATGGAGGGAAAACCAATGACATGGTTGTCAAACAAAGGGAAGCTTTCAAAGCAACTTCAGTTGGAGAAATCAACGAAATGATAGGCCAGGTGAAATTATATGAGAATCTCACTAGTGATTATTCATCGGTGCTAGAAAGCACAGATTCGATTCAACCAGGTGATCTTTTCTTTTCCCGCGAATGCAATGCCTTTCAAGGGAAGAATTCTTCATTGCCAAAAAGCATTCAACAATGTGGTCATTTTAGTCCAAGGCCATTGGTGACCCCCGTGAGAGCTCCCTCTGAAAATAGAGAAAATGGTGATCTTAACCTCAATATGAATATCCGAGGAACATCGTCCAATAATGTCTTGTCTCGATCAACCACTACAAGTTCTGCTGCTACAAGCAGAAAGGGTAGTGGCACTGGGAAGCCAAGTAGCGTGACAAGCGATGGTAGTGTAAAGACAACTGCAAGCATGCAGAGATTCACATCCAATCGAAAGAAGAACCAGAAAGATGCATGGTTTTCTTGTATGAGAACAGGAAACTGTAGAACGACAAGAAAATCGCCTGAACGTCGACCAATTGATGAAGCTTCTTTCATTGGAAGGGCATCAGTGGTGGAAAACCTCCCACAATTCTGGGCAGATAAACACCAACCTGCTTCACTTAATGGCTTCATTTGCAACAAACAAGAAGCTCAACTTCTCAAGGAATTGGTGTCTCGGGGGTCTTGTCCTCATATTCTGCTCAAAGGACCCTCCGGTGCCGGGAAAAGACAACTAGCAATGGCCCTTCTTCGAGAGATATACGGTGATGCATGCTGTAATGACAAAAGGCTTATGAAAGTATCTGTTCCAATAACATCCAGTTCTCATCACATGGAGCTCGATGTAAATTCAGATCCAAATGCTAAATATGCTTTAATGGGATTAATCAAAGAAATTAGCAATATATATGCTATTGCCCCCGAAGTCAGCAATATTAATTTCAAGTCAGATTATAAAGTAATAGTTCTTTATGAGGTCCACAAAGCAGTAGATAACATTCAGCACATTATCAAATGGACCATAGACCGCTATTCAGATATATGCAAATTAGTACTCTGCCTTGAAGATGATGCATGCATCATTGAACCTGTGAAAAATCGGTTCAAAGTTATCAAAGTTGAGGCTCCTCAAACTCTTGAAATTGTTGAGGTCCTTATTCAGATAGCAAAGAATGAGGAAATTGATCTACCCATGAATTTTGCTGCGAAGATTGCTACAAAGTCTAAGCAGAACCTCAGACAAGCTATCATGGCTCTTGAAGCATGCAAAGCTCACAACTATCCATTTTCAGAAGAACAACCAATTTCAATTGGATGGGAGGAGATCGTAATAGAAGTTGCTGCAGAAATCGTAGCTGATCCCTCATTTTCACGATTACTCTCAATACGAGGGAAATTTCAAATGCTTCTCCTGGATTTTGTCCACCCAAAACTGATTCTCCAGAAACTCGTGGAACAGCTCCTAAAAAGAATTGAGGCCAACTTAAAAAGGGAACTATACTATTGGCATGCTTATTATGTGAGTTTCTCTTTCCATAAATTGCCTTAA 2067 0.4175 MEQSSPDNRFSHTPNSTFSTKKGRSGYEPSDTETEWQEIPRHERERRNLILGPEETKALTLMNKTPMALHRRYSTRFETEVSISSSSTASVSRRKHHSKSPYKLRVAGDDAASSSSITVSPFSRSHEQRTPSRENRKVVEATEKPHYKRAVTAPRLREHESNHGGKTNDMVVKQREAFKATSVGEINEMIGQVKLYENLTSDYSSVLESTDSIQPGDLFFSRECNAFQGKNSSLPKSIQQCGHFSPRPLVTPVRAPSENRENGDLNLNMNIRGTSSNNVLSRSTTTSSAATSRKGSGTGKPSSVTSDGSVKTTASMQRFTSNRKKNQKDAWFSCMRTGNCRTTRKSPERRPIDEASFIGRASVVENLPQFWADKHQPASLNGFICNKQEAQLLKELVSRGSCPHILLKGPSGAGKRQLAMALLREIYGDACCNDKRLMKVSVPITSSSHHMELDVNSDPNAKYALMGLIKEISNIYAIAPEVSNINFKSDYKVIVLYEVHKAVDNIQHIIKWTIDRYSDICKLVLCLEDDACIIEPVKNRFKVIKVEAPQTLEIVEVLIQIAKNEEIDLPMNFAAKIATKSKQNLRQAIMALEACKAHNYPFSEEQPISIGWEEIVIEVAAEIVADPSFSRLLSIRGKFQMLLLDFVHPKLILQKLVEQLLKRIEANLKRELYYWHAYYVSFSFHKLP* 689
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1042 688 MobiDBLite consensus disorder prediction 77 138 - -
Apr7g1042 688 MobiDBLite consensus disorder prediction 1 25 - -
Apr7g1042 688 MobiDBLite consensus disorder prediction 261 324 - -
Apr7g1042 688 MobiDBLite consensus disorder prediction 243 324 - -
Apr7g1042 688 MobiDBLite consensus disorder prediction 1 47 - -
Apr7g1042 688 CDD AAA 386 544 - -
Apr7g1042 688 Gene3D - 369 549 IPR027417 -
Apr7g1042 688 Gene3D - 611 684 - -
Apr7g1042 688 PANTHER OS02G0704966 PROTEIN 175 682 - -
Apr7g1042 688 PANTHER REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT 175 682 - -
Apr7g1042 688 MobiDBLite consensus disorder prediction 26 47 - -
Apr7g1042 688 Gene3D - 551 608 - -
Apr7g1042 688 SUPERFAMILY post-AAA+ oligomerization domain-like 611 679 IPR008921 GO:0003677|GO:0006260
Apr7g1042 688 MobiDBLite consensus disorder prediction 111 126 - -
Apr7g1042 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 369 597 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1042 Apr-Chr7 17429580 17432971 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1042 370 679 Core DNA Replication Machinery Family AT5G27740 38.580 1.15e-68 227
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1042 K10756 - gmx:100795321 1005.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1042 7 17429580 17432971 Apr7g1042 7 17429580 17432971 ECH