Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1036 ATGGCGGTTCACGATGACCCCATGGTCGTTCCCACCCTCTCTCCGCCCAACACCTACGAAGCCGTGGTCAACGGTGGAACCTTTGACCGATTGCACGACGGCCACCGCCTCTTCCTCACTGCTTCAGCGGAGTTGGCTAGGCGCCGGATCGTAATTGGTGTTTGCGACGGCCCTATGCTGGCAAAGAAGCAGTTTGCTGAGCTGATACAGCCCATTGAGGAACGGATGCATAATGTTGAAACATTCATTAAGTCTATCAAGCCAGATTTGGAAGTGCAAGCTGTACCAATCACAGATCCGTTTGGCCCTTCCATTATAGATGAAAATTTGGAGGCTGTGATAGTAAGCAAAGAGACATTACCGGGTGGATTGGCAATAAACAGAAGAAGAGCTGAAAGAGGCCTTTCACAGTTGAAGATTGAAGTTGTAGATTTGCTTTCTGGAGAATCAGGTGAAGTTAAGCTGAGTTCATCTATGTTACGAAAGCTGGAGGCTGAAAAGGCCAAACAACCAAGCACAATATCTCAGACATAGTACGAAGAATTTGTTTAACTTGTTTTTTGTGCGTTTTTGCCAAAATTTGCAAAGATGAATGATTTGATGACAAAATCGTTCCTAAGTTATGTTGAACTGAAGAAGCAGGCAAGGAAAGACGTTGAAAACGATCTTGACATTGAATTAGGGAAACTCAACCCCACGGAAGACCATAACCTCTCTCAGTTCTTCCAAGAAGTTGAAGTAACCAAGGTTGAAATGGAAGAGATCACCAATCTCTTATGTGATCTTCAGCAACTGAATGAAGAGACAAAGTGCACACACAGTGCCAAAGTTCTACGTGGTCTAAGGGACCGCATGGAGTCTGACATGGTTGCCGTGCTTCGCAAGGCAAGGTTTATCAAGGCAAGGCTTGAGGCTCTTGACCGATCCAACATAACCAATCGCACTTTATCAGAATCCTACAAAGAGGGTACCTCCATTGATAGAACAAGATTGACTGTGACGAATGGTTTGAGGGTCAAACTTAGGGACATGATGAATGACTTTCAGTCCTTGAGAAACAAGATTCTATCGGATCACAAGGAAGATTTGAAGAGAAGGTACTATACGGTAACGGGTGAGGTTCCCACTGAGGAGATCATGGAGAAAATGATCTCAGGGAGTCTCAAAGTTGAGTTTTTGGCTGGGAAAACGGATGCTGATTTGGGCACTCAGGTTAGGCATGAGGCTGTGATGGATATCCAAAGGAGTTTGAAAAAGCTTCACCAGGTCTTTCTTGATATGGCTATTCTGGTGGAGACCCAAGGAGAAAACGTGGATAACATTGAGGATAATTTAGCCACTGCGGGTAACTTCATCCATGGGGGAACTAACAGTCTTTACTATGCCAACCAGATGAAGAAGAATAACAAAAAATGGGTCTGTTGGGTTTTTGCTGTGGGGCTGATTATACTACTGGTGTGCATTGTTTCAATGTTGTCTTCTTGA 1485 0.4444 MAVHDDPMVVPTLSPPNTYEAVVNGGTFDRLHDGHRLFLTASAELARRRIVIGVCDGPMLAKKQFAELIQPIEERMHNVETFIKSIKPDLEVQAVPITDPFGPSIIDENLEAVIVSKETLPGGLAINRRRAERGLSQLKIEVVDLLSGESGEVKLSSSMLRKLEAEKAKQPSTISQT*YEEFV*LVFCAFLPKFAKMNDLMTKSFLSYVELKKQARKDVENDLDIELGKLNPTEDHNLSQFFQEVEVTKVEMEEITNLLCDLQQLNEETKCTHSAKVLRGLRDRMESDMVAVLRKARFIKARLEALDRSNITNRTLSESYKEGTSIDRTRLTVTNGLRVKLRDMMNDFQSLRNKILSDHKEDLKRRYYTVTGEVPTEEIMEKMISGSLKVEFLAGKTDADLGTQVRHEAVMDIQRSLKKLHQVFLDMAILVETQGENVDNIEDNLATAGNFIHGGTNSLYYANQMKKNNKKWVCWVFAVGLIILLVCIVSMLSS* 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1036 492 CDD SynN 236 386 IPR006011 GO:0016020
Apr7g1036 492 Gene3D - 395 491 - -
Apr7g1036 492 Gene3D HUPs 21 170 IPR014729 -
Apr7g1036 492 SMART tSNARE_6 393 460 IPR000727 -
Apr7g1036 492 Pfam SNARE domain 434 484 IPR000727 -
Apr7g1036 492 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 398 460 IPR000727 -
Apr7g1036 492 SUPERFAMILY Nucleotidylyl transferase 22 166 - -
Apr7g1036 492 CDD SNARE_syntaxin1-like 402 457 - -
Apr7g1036 492 Pfam Cytidylyltransferase-like 25 98 IPR004821 GO:0003824|GO:0009058
Apr7g1036 492 Gene3D - 231 362 - -
Apr7g1036 492 PANTHER SYNTAXIN-112 198 488 - -
Apr7g1036 492 SUPERFAMILY t-snare proteins 233 453 IPR010989 GO:0016020|GO:0016192
Apr7g1036 492 Pfam Syntaxin 238 433 IPR006011 GO:0016020
Apr7g1036 492 PANTHER SYNTAXIN 198 488 IPR045242 -
Apr7g1036 492 SMART SynN_4 231 358 IPR006011 GO:0016020
Apr7g1036 492 CDD PPAT_CoAS 22 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1036 Apr-Chr7 17391468 17397766 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1036 195 492 SNARE and Associated Proteins AT2G18260 59.935 1.42e-128 374
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1036 K08486 - cit:102608467 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1036 7 17391468 17397766 Apr7g1036 7 17391468 17397766 ECH