Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g1016 ATGTCTGACTCACACCTAACTTTCTGTTCTCTTTCATCCATTCTTCCTCCTCTCTTAATCTTCATCTTCATTCTCTTCAAAAGAAAGCAAGCCAGGCCCAAGCTTAATCTCCCCCCAGGAAACATGGGCTGGCCCTTTCTTGGGGAGACCATTGGGTATTTGAAGCCTTATTCTGCCACAACAATAGGGGAATTCATGGAGCAACACATAGCAAGGTATGGTAAAATTTACAAGTCGAAATTGTTTGGGGAGCCAGCAATAGTGTCAGCAGATGCAGGATTGAACAGGTTCATATTACAGAACGAAGGGAAATTGTTCGAGTGTAGCTATCCAAGAAGCATTGGTGGAATACTAGGGAAATGGTCTATGTTGGTCTTAGTTGGTGACATGCATAGGGACATGCGGGTTATATCTCTCAACTTTCTAAGCCATGCCAGGCTCAGAACACACCTCTTGAAAGAGGTGGAGAATCATACCCTCCTTGTTCTTAACTCTTGGAAGGATAATTCCACATTCTCAGCTCAAGATGAAGCTAAGAAGTTCACCTTCAATTTAATGGCTAAGCATATCATGAGTCTGGATCCTGGGAATATCGAGACAGAGCATCTAAAGAAAGAGTATGTCACTTTCATGAAAGGGGTGGTGTCGGCTCCTTTGAATTTACCTGGAACTGCATACCGCAAGGCATTAAAGTCAAGGTCCACCATACTGAAGTTCATAGAGGGGAAAATGAAAGAAAGAGTGAAAAGAATCGAAGAGGGGAATGAAAGTTTGGAGGAAGATGATCTTCTGAACTGGGTTTTGAAGCATTCGAATCTTTCAACGGAGCAAATTCTTGACTTGATTCTCAGCTTGCTCTTTGCTGGACATGAAACCTCATCGGTAGCTATAGCTCTAGCTATTTACTTCTTGCCGACTTGTCCTCAAGCTATACAACAGTTAAGGGAAGAACATACAGAAATTGCCAGAGCCAAGAAGCAAGCAGGGGAAGTTGAACTGACTTGGGATGACTACAAACGAATGGAATTTACTCATTGTGTTGTGAACGAGACACTTAGACTGGGAAATGTTGTGAGGTTCCTTCACAGAAAGGCGCTGAAGGATGTTCGGTACAAAGGTTATGACATTCCATGTGGGTGGAAAGTCCTTCCGGTGATTGCAGCCGTGCATCTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAATGGTAGCCGTGGAAGTTGCCCAAGCAAGAGCACAGCCACCAATAACTTCCTACCATTCGGAGGAGGACCACGATTATGTGCGGGATCAGAGTTAGCCAAGGTTGAAATGGCTGTTTTCATCCACCATCTCATTCTCAACTACCATTGGGAATTGGCTGATACCGATCAAGCCTTTGCATACCCTTTTGTTGATTTTCCCAAAGGCCTTCCCATTAGAGTCCAAACCCACTCTTTGATTTGA 1470 0.4395 MSDSHLTFCSLSSILPPLLIFIFILFKRKQARPKLNLPPGNMGWPFLGETIGYLKPYSATTIGEFMEQHIARYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRVISLNFLSHARLRTHLLKEVENHTLLVLNSWKDNSTFSAQDEAKKFTFNLMAKHIMSLDPGNIETEHLKKEYVTFMKGVVSAPLNLPGTAYRKALKSRSTILKFIEGKMKERVKRIEEGNESLEEDDLLNWVLKHSNLSTEQILDLILSLLFAGHETSSVAIALAIYFLPTCPQAIQQLREEHTEIARAKKQAGEVELTWDDYKRMEFTHCVVNETLRLGNVVRFLHRKALKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNGSRGSCPSKSTATNNFLPFGGGPRLCAGSELAKVEMAVFIHHLILNYHWELADTDQAFAYPFVDFPKGLPIRVQTHSLI* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g1016 489 Pfam Cytochrome P450 38 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 SUPERFAMILY Cytochrome P450 34 483 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 PRINTS E-class P450 group I signature 277 294 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 PRINTS E-class P450 group I signature 297 323 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 PRINTS E-class P450 group I signature 345 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 PRINTS E-class P450 group I signature 426 436 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 PRINTS E-class P450 group I signature 436 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 Gene3D Cytochrome P450 26 485 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 Coils Coil 241 261 - -
Apr7g1016 489 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 429 438 IPR017972 GO:0005506|GO:0016705
Apr7g1016 489 PANTHER CYTOCHROME P450 26 66 485 - -
Apr7g1016 489 PRINTS P450 superfamily signature 288 305 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 PRINTS P450 superfamily signature 427 436 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 PRINTS P450 superfamily signature 436 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Apr7g1016 489 PANTHER BNAC01G23810D PROTEIN 66 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g1016 Apr-Chr7 17197750 17202672 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g1016 27 409 Cytochrome P450 AT3G50660 75.990 0.0 643
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g1016 K09587 - gmx:100789515 917.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g1016 7 17197750 17202672 Apr7g1016 7 17197750 17202672 ECH
Apr7g1016 7 17197750 17202672 Apr3g0273 3 5374811 5385686 PCT