Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0999 ATGAGAGTTCCCGTTCCCTCATCCCCACAGCCCAACCCAAAACCCAGTAACGCACTCCGTACCATTGCCCTGAACAACCCAGGCCTCTGCTACGAGCCCACTTCTGTCCTCGACCTGTGCCGCAGCCCCAGCCCGGGCAGCGTCCCTGAAAAACCCACGGATCACTCCGTTGTCGTAACTAACTCCCAAGACTGTCTAGACCTGGACGACCATGCGTTGCATAACTTGGATTGGGATTCCATCATGAAGGATTTGGGCTTGCACGACGACACGGGCACCCCCGTTTTGAAGACTATTCTTCACCCCAACAACGACTTCACACCCTTTGACCACGCCGAATTAACCGACATCTACTCCACCCAAAACGTACCTTACAACTACCCCGCTCTCGACCATTTGGTTCAAGACTTTAGCCACCACCCCAACGGTTTCGATTTCATTGAAGAGCTCATACGCGCCGCCGATTGCTTCGACACCAACCAGCTACACGTGGCGCAAGTGATATTGGAGCGGCTCAATCAACGGCTACGATCCCCCGTGGGAAAACCCCTCCACCGCGCAGCGTTTTACTTCAAAGACGCACTCCACTCTCTTCTCTCCGGTTCGAACCGGACGCCGAGGCTTTCTTCGTTGGTGGAAATTGTGCACGGTATCAGAACCTTCAAGGCCTTCTCTGGAATCTCTCCGATTCCAATGTTCTCCATCTTCACCACCAATCAAGCACTCCTCGATCATGCCGCATCTTCCTTCATGCACGTCATCGACTTCGATATTGGCCTTGGCATTCAATACGCTTCTCTCATGAAGGAGATTGCGGAAAAGGCGGAATCGCCTTTTCTGCGAATTACCGCCGTTGTTCCTGAAGAGTTCGCCGTGGAGAGCACGCTCGTCCGCGACAACCTCACGCAGTTCGCTCTCGAACTCAGGATCCGAGTCCAGGTTGAGTTCGTGCTGCTTCGAACCTTCGAGACGCTCTCCTTCAAGGCCGTCAAGTTCGTCGACGGCGAGAAGACTGCAGTACTCTTGTCGCCGGCGATATTTCGCCGCCTCGTTTCTGCCGGCAACGCAGCCGCTTTTCTGGCGGATGTGCGGAGGGTCTCGCCCAGCGTGGTGGTCTTCGTGGACGGGGAAGGGTGGTCGGAGGCGGCGGCGGCGTCTTCGTTCCGGCGCGGCGTGATGAGTAGCCTGGAGTTCTACTCGATGATGCTGGAGTCTCTGGATGCATCGACGGTGGGGGGAGGAGGTGAGTGGGTGAGGAGGATAGAGATGTTGCAGATGCGCCCGAAGATTTTGGCGGCGGTGGAGAGCGCGGGTCGGAGGATGCCGCCGTGGAGGGAGGCGTTTTACGGGGCGGGAATGAGGCCGGTTCAGTTGAGCCAGTTCGCCGATTTTCAAGCGGAGTGCTTGTTAGCTAAGTCACAAATCAGAGGGTTCCAGGTGGCGAAGCGCCAGAACGAACTGGTGCTATTCTGGCATGACCGGGCCATGGTTGCCACGTCAGCTTGGCGATGCTAG 1515 0.5677 MRVPVPSSPQPNPKPSNALRTIALNNPGLCYEPTSVLDLCRSPSPGSVPEKPTDHSVVVTNSQDCLDLDDHALHNLDWDSIMKDLGLHDDTGTPVLKTILHPNNDFTPFDHAELTDIYSTQNVPYNYPALDHLVQDFSHHPNGFDFIEELIRAADCFDTNQLHVAQVILERLNQRLRSPVGKPLHRAAFYFKDALHSLLSGSNRTPRLSSLVEIVHGIRTFKAFSGISPIPMFSIFTTNQALLDHAASSFMHVIDFDIGLGIQYASLMKEIAEKAESPFLRITAVVPEEFAVESTLVRDNLTQFALELRIRVQVEFVLLRTFETLSFKAVKFVDGEKTAVLLSPAIFRRLVSAGNAAAFLADVRRVSPSVVVFVDGEGWSEAAAASSFRRGVMSSLEFYSMMLESLDASTVGGGGEWVRRIEMLQMRPKILAAVESAGRRMPPWREAFYGAGMRPVQLSQFADFQAECLLAKSQIRGFQVAKRQNELVLFWHDRAMVATSAWRC* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0999 504 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 8 503 IPR005202 -
Apr7g0999 504 ProSiteProfiles GRAS family profile. 137 503 IPR005202 -
Apr7g0999 504 Pfam GRAS domain family 147 503 IPR005202 -
Apr7g0999 504 PANTHER SCARECROW-LIKE PROTEIN 15 8 503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0999 Apr-Chr7 17035305 17037337 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0999 66 503 GRAS Transcription Factor Family AT4G36710 56.051 1.60e-169 486
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Apr7g0999 GRAS 4.7e-81 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0999 - - gmx:100807470 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0999 7 17035305 17037337 Apr7g0999 7 17035305 17037337 ECH
Apr7g0999 7 17035305 17037337 Apr3g0261 3 5083544 5086321 PCT