Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0997 ATGGGAACTGGTGAAGAAAGCACAGCTAAACCTTCCAAACCATCTTCTACTTCTTCAACACAGATACCGTTGGCACCTTCATATCCTGATTGGTCTGGCTCCATGCAGGCTTATTATGCTCCTGGAGCCACTCCGCCTCCTTTTTTTGCCTCAACTGTTGCTTCCCCAACTCCCCATCCTTATTTGTGGGGAAGCCAGCATCCTTTAATTCCACCATATGGTACTCCTGTTCCATATCCAGCTATATATCCTCCTGGGAGTGTCTATGCTCATCCTAGCATGGCAACGACTCCAAGCATCACACAGCATGGTACAAGGTCTGTAGGCAAGGGGCCTGAGGGAAAAGATCGGGTTTCTACCAAAAGTTCAAAGGGAATGCCTGCAAATACTGTTTCCAAGGCAGGAGACAATGGAAAGGCAGGCTCAGGGTCTGGAAATGATGGCCTCTCACAAAGTGCTGATAGTGGTTCAGAGGGATCATCAGATGGTAGTGATGAGAATACTAACCAACAGGAATCCGGGACAAACAAGAAGGGGAGTTTTGACCAAATGCTTGTTGATGGGGCCAATGCACGGAACAATTCTGTCGCTGCCATTTCTCAATCTTCAATACCTGGAAAGTCTGTTGTGTCAATGTCTGCAACTAATCTTAATATTGGAATGGACTTGTGGAATGCATCTCCTGCTAGCGCCGAAGGCGCAAAAGTGAGACACAATCAATCTGCTGCCTCGGGAGCCGTTACACCTCCAACCATAATGGGACGAGAAGTTGCACTTGGTGAACAGTGGATACAAGACGAACGTGAGCTGAAAAGACAGAAGAGGAAACAGTCTAATAGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGTGAAGAGTTACAAAAGAGGGTGGAGTCTCTGGGAAGTGAGAATCGAACTCTGAAAGAAGAGCTTCAGAGAGTATCTGAAGAATGCAAGAAAATTATATCCGAAAACAATTCTATCAAGGAAGAGTTAGAGCGGTTGGGTGGGCCAGAAGCAGTTGCTAGCCTCGAATAA 1050 0.4686 MGTGEESTAKPSKPSSTSSTQIPLAPSYPDWSGSMQAYYAPGATPPPFFASTVASPTPHPYLWGSQHPLIPPYGTPVPYPAIYPPGSVYAHPSMATTPSITQHGTRSVGKGPEGKDRVSTKSSKGMPANTVSKAGDNGKAGSGSGNDGLSQSADSGSEGSSDGSDENTNQQESGTNKKGSFDQMLVDGANARNNSVAAISQSSIPGKSVVSMSATNLNIGMDLWNASPASAEGAKVRHNQSAASGAVTPPTIMGREVALGEQWIQDERELKRQKRKQSNRESARRSRLRKQAECEELQKRVESLGSENRTLKEELQRVSEECKKIISENNSIKEELERLGGPEAVASLE* 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0997 349 MobiDBLite consensus disorder prediction 270 294 - -
Apr7g0997 349 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 274 289 IPR004827 GO:0003700|GO:0006355
Apr7g0997 349 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 349 IPR044827 GO:0003700|GO:0006355|GO:0043565
Apr7g0997 349 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 269 332 IPR004827 GO:0003700|GO:0006355
Apr7g0997 349 Pfam G-box binding protein MFMR 1 94 IPR012900 -
Apr7g0997 349 Coils Coil 280 335 - -
Apr7g0997 349 MobiDBLite consensus disorder prediction 92 106 - -
Apr7g0997 349 Gene3D - 270 326 - -
Apr7g0997 349 CDD bZIP_plant_GBF1 272 322 IPR045314 GO:0003700|GO:0006355
Apr7g0997 349 Pfam bZIP transcription factor 267 329 IPR004827 GO:0003700|GO:0006355
Apr7g0997 349 MobiDBLite consensus disorder prediction 1 28 - -
Apr7g0997 349 MobiDBLite consensus disorder prediction 87 189 - -
Apr7g0997 349 PANTHER G-BOX-BINDING FACTOR 1 1 349 - -
Apr7g0997 349 MobiDBLite consensus disorder prediction 122 180 - -
Apr7g0997 349 SUPERFAMILY Leucine zipper domain 270 325 IPR046347 GO:0003700|GO:0006355
Apr7g0997 349 SMART brlzneu 267 331 IPR004827 GO:0003700|GO:0006355
Apr7g0997 349 MobiDBLite consensus disorder prediction 1 27 - -
Apr7g0997 349 Pfam Disordered region downstream of MFMR 116 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0997 Apr-Chr7 17019618 17025126 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0997 1 349 bZIP Transcription Factor Family AT4G36730 51.852 2.62e-104 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Apr7g0997 MFMR_assoc 2.3e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0997 K09060 - gmx:100808533 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0997 7 17019618 17025126 Apr7g0997 7 17019618 17025126 ECH
Apr3g0260 3 5074014 5078646 Apr7g0997 7 17019618 17025126 ECH