Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0980 ATGCGTTTCTTTCCCTTCATTCCTCTCTTCATTTTCAGCCTTTTAATCTGCAGGTTCTCTATGATTATGGGGCAGCAACCTTATATTGGTTTAGGCACAGTAGCCTGCCCTCGAAAGGGTAACTCAAAGTCTATCCGTGGCTACACTTGTAATGGTGCAAATCGCAGTTGCCAAGCTTACCTTACCTTCAGATCTCAACCTATATACAGTTCTGTCTCCTCAATATCTGCTTTGTTGGGTTCTGACCCATCCCAACTTGCTCAAATAAATTCTGTTTCCCTGAATGACACATTTGACATAAACAAGTTGGTGATTGTTCCAGTCAACTGTTCTTGTGCAGGTGAGTATTATCAGACAAACACATCCTATGTGTTCCATAATTCAGAAACTTACTTCTTGGTTGCAAACAACACTTTTGAGGGCCTAACAACTTGCCAAGCTTTGCAGAATCAAAATGACAATCCTGCTAATATATACTCCGGTAGAAAACTTGCAGTGCCACTTAGATGTGCTTGTCCCACAAAGAATCAAACTGAGAAAGGCATAAGGTACCTCTTAAGTTACCTTGTAAACTGGGGTGATTCTGTTTCACTCATTAGTGAGAGGTTTGGTGTCAACACTGACACCACTCTTGAGGCTAATAGCCTTGCTATGACACAATCCACCATCTATCCCTTCACCACACTTCTCCTTCCCCTTCATGATAAGCCCTCCAATTCTCAAACCGTTTCTCCACCTCAAACTACTCCACCACCCTCACTTTCCTCTTCTTCCCAAAGCTCAAACAAAACGTGGATGTATGTAGTTGTTGGAGTTGTTGTAGGAGTTTTTGCCTTAATAGCAATTCTCTCTGCTGTAATTTTATTCACACGCTATGGCAAAAACAAAGAGAAACAAGGTTCAGTGATTGTGTCCAATAGTTTTGAGGCAGTTGAGAAAAAACCACAAGGGAAGGGAACAGAGAAAGGAAATGAAAAATTATCAGAGATCATATCTGGCATAGCTCAATCGTTCAGAGTGTACAGTTTTGAGGAACTACAGCTTGCAACAGATAATTTTAGTCCTAATTGCTGGATCAAAGGGTCGGTTTACCGCGGTGTTATTAAAGGAGATTTGGCTGCAATTAAAAAGACAGAAGGAGATGTATCTAAAGAGATAGAAATATTGAACAAGGTCAATCATTCTAATGTGATTCGCCTATCGGGGGTGTGCTTCCACGAGGGGCGTTGGTACCTTGTTTATGAGTATGCTGCTAATGGATCCTTGAGTGAATGGATCTACTTCAGCAACGTGGATGGGAAGTTTCTGAATTGGACAAAGAGAATGCAAATTGCATTGGATGTGGCCACAGGACTTGATTATCTTCATGGTTTCACGTCTACTCCTCATATCCACAAGGATATTAAGAGTAGTAACATTCTCTTGGACAGTGATTTCAGGGCAAAGGTAGCAAATTTGAGCCTCGCGAGATCAATGGAAGGAACAGATAACGAATTTCCCGCGACAAGACACATTGTTGGGACAAGGGGTTACATGGCTCCAGAGTATTTGGAACATGGTCTTATATCTACAAAGCTTGATGTCTATGCATTTGGGGTATTAATGCTGGAAGTGCTCACTGGAAAAGAGGTTGCTGCTATTTTAACAGAAGAGAATGCTGATTTGTCACGCGTTTTAAGTTCCATACTTGGTGAGGAAAGTGGCCAAGAGAGGTTGAAGGAGTTTATGGATCCCTCACTACAAGCTAATTATCCATTAGAACTTGCTATGTTTGTGATTGAAATGATTGACAATTGCATAAAGAAAGATCCAGCAAGTCGCCTTGATGTGCACCAGATTGTTCTAGCTCTGTCCAGAACACTTGACTCTTCATTGAGTTGGGAAAGATTAATGAATATCTCTGAATAA 1908 0.4114 MRFFPFIPLFIFSLLICRFSMIMGQQPYIGLGTVACPRKGNSKSIRGYTCNGANRSCQAYLTFRSQPIYSSVSSISALLGSDPSQLAQINSVSLNDTFDINKLVIVPVNCSCAGEYYQTNTSYVFHNSETYFLVANNTFEGLTTCQALQNQNDNPANIYSGRKLAVPLRCACPTKNQTEKGIRYLLSYLVNWGDSVSLISERFGVNTDTTLEANSLAMTQSTIYPFTTLLLPLHDKPSNSQTVSPPQTTPPPSLSSSSQSSNKTWMYVVVGVVVGVFALIAILSAVILFTRYGKNKEKQGSVIVSNSFEAVEKKPQGKGTEKGNEKLSEIISGIAQSFRVYSFEELQLATDNFSPNCWIKGSVYRGVIKGDLAAIKKTEGDVSKEIEILNKVNHSNVIRLSGVCFHEGRWYLVYEYAANGSLSEWIYFSNVDGKFLNWTKRMQIALDVATGLDYLHGFTSTPHIHKDIKSSNILLDSDFRAKVANLSLARSMEGTDNEFPATRHIVGTRGYMAPEYLEHGLISTKLDVYAFGVLMLEVLTGKEVAAILTEENADLSRVLSSILGEESGQERLKEFMDPSLQANYPLELAMFVIEMIDNCIKKDPASRLDVHQIVLALSRTLDSSLSWERLMNISE* 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0980 635 ProSiteProfiles LysM domain profile. 186 231 IPR018392 -
Apr7g0980 635 Pfam Protein kinase domain 376 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0980 635 Gene3D Transferase(Phosphotransferase) domain 1 418 629 - -
Apr7g0980 635 Gene3D Phosphorylase Kinase; domain 1 325 416 - -
Apr7g0980 635 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 629 - -
Apr7g0980 635 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 2 629 - -
Apr7g0980 635 MobiDBLite consensus disorder prediction 237 259 - -
Apr7g0980 635 Pfam LysM domain 188 232 IPR018392 -
Apr7g0980 635 SUPERFAMILY Protein kinase-like (PK-like) 335 617 IPR011009 -
Apr7g0980 635 SMART serkin_6 358 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0980 635 Gene3D LysM domain 186 246 IPR036779 -
Apr7g0980 635 ProSiteProfiles Protein kinase domain profile. 297 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0980 Apr-Chr7 16858214 16860121 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0980 9 629 Receptor kinase-like Gene Family AT2G23770 42.381 2.20e-170 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Apr7g0980 Pkinase 1.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0980 - - gmx:100815842 971.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0980 7 16858214 16860121 Apr7g0980 7 16858214 16860121 ECH