Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Apr7g0979 | ATGGCCTCTCGTTCTCACAGTCTTTGTCTTGCACTCATGTTGTTTTTCACTAACATTGCAGCTCAATCACAACAAACCAATGGAACAAACTTTTCATGCCCAGCTGATTCACCTCCTTCCTGTGAAACCTATGTAACATACATTGCTCAGTCTCCTAATTTCTTGAGTCTGACCAACATATCTAATATATTTGATACCAGCCCTTTATCCATTGCAAGAGCTAGTAACTTAGAGCAAGAGGATGACAAGCTGATTCCTGACCAAGTCTTACTGATACCTGTAACTTGTGGTTGCACTGGAACCCTCTCTTATGCCAATATCTCCTATGAGATCAATCAAGGCGATAGCTACTCCTTTGTTGCAACCACTTTATACGAGAATCTCACCAATTGGCATGCAGTGATGGACTTAAACCCTGGTCTAAGTCCAAATATGTTGCCAGTAGGCGTCAAAGTAATAGTTCCTTTATTCTGCAGGTGCCCTTCAAAGAACCAGTTGGACAAAGGGATACAGTACCTGATTACCTACGTGTGGCAGCCCAATGACAATGTTTCCCTTGTAAGTGCCAAGTTTGGTGCATCACTACAAAACATATTGACCGAAAACAACTATGGTCAAAACTTCACTTCTGCAACCAACCTTCCAGTTTTGATCCCAGTGACACACTTGCCAGATCTTATTCAACCTCATTTGGATGTAAAAAAGGGAAGCATTCATCTTTCAGTTATACTTGGCATTAGCCTGGGATGCACAGTTTTAACTGTAGTTTTAATGGTATTACTGGTGTATGTGTATTGTTTGAAAATGAAGAGTTTGAACAGGAGTGCTTCATCAGCCGAGACTGCGGATAAGCTACTTTCTGGTGTTTCAGGCTATCTAAGGAAGCCAACTGTGTATGAAATTGATGTGATCATAGAAGCTACCATGAGCCTCAGTGAGCAGTGCAAGATTGGTGAATCAGTGTACAAGGCAAATATAAAAGATCAGGTTTTGGCAGTAAAAAAAATCAAGGAAGATGCCTCGGAGGAGCTGAAAATTCTGCAGAAGTTGAATCATGGAAATCTGGTGAAATTAATGGGTGTTTCATCAGACAATGATGGGAATTGCTTTGTGGTTTATGAATATGCTGAAAATGGGTCTCTTGATGACTGGCTATTCTCCAAGTCTTCTTCAGACACATCAAGCTCAATGGCTTCCCTTACTTGGTGTCAAAGGATAAGCATAGCTGTGGATGTTGCAATGGGTCTACAATACATGCATGAACATGCTTATCCAAGAATAGTCCACAGGGACATCACGAGTAGTAATATCCTTCTTGACTCAAACTTTAAGGCCAAGATAGCTAATTTTTCCATGGCCAGAACTTTTACTAACCCAATGATGCCAAAAATAGATGTCTTTGCTTTTGGGGTGGTGCTAATAGAGTTGCTTACAGGAAGGAAAGCCATAACAACCAAAGAAAATGGCGAGGTGGTTATGCTGTGGAAGGACATTTGGAAGATCTTTGATCAAGAAGAGAATAGAGAGGAGATGCTCAGAAAATGGATGGACCCTAAGTTAGAGAGCTTTTATCCTATAGATTATGCTCTCAGCTTGGCTTCCTTGGCAGTGAATTGCACTGCAGATAAGTCCTTGTCCAGACCAACAATTGCAGAAATTGTTCTTAGCCTCTCCCTTTTCACTCAGCCATCTCCTGCTACATTGGAGAGATCATTGACTTCTGGATTAGATGTAGAAGTTACTCAAATTGTCACTTCCATAGCTGCTCGTTGA | 1773 | 0.4112 | MASRSHSLCLALMLFFTNIAAQSQQTNGTNFSCPADSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPLSIARASNLEQEDDKLIPDQVLLIPVTCGCTGTLSYANISYEINQGDSYSFVATTLYENLTNWHAVMDLNPGLSPNMLPVGVKVIVPLFCRCPSKNQLDKGIQYLITYVWQPNDNVSLVSAKFGASLQNILTENNYGQNFTSATNLPVLIPVTHLPDLIQPHLDVKKGSIHLSVILGISLGCTVLTVVLMVLLVYVYCLKMKSLNRSASSAETADKLLSGVSGYLRKPTVYEIDVIIEATMSLSEQCKIGESVYKANIKDQVLAVKKIKEDASEELKILQKLNHGNLVKLMGVSSDNDGNCFVVYEYAENGSLDDWLFSKSSSDTSSSMASLTWCQRISIAVDVAMGLQYMHEHAYPRIVHRDITSSNILLDSNFKAKIANFSMARTFTNPMMPKIDVFAFGVVLIELLTGRKAITTKENGEVVMLWKDIWKIFDQEENREEMLRKWMDPKLESFYPIDYALSLASLAVNCTADKSLSRPTIAEIVLSLSLFTQPSPATLERSLTSGLDVEVTQIVTSIAAR* | 591 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Apr7g0979 | 590 | Pfam | Protein tyrosine and serine/threonine kinase | 331 | 457 | IPR001245 | GO:0004672|GO:0006468 | |
Apr7g0979 | 590 | SMART | LysM_2 | 46 | 93 | IPR018392 | - | |
Apr7g0979 | 590 | SMART | LysM_2 | 108 | 155 | IPR018392 | - | |
Apr7g0979 | 590 | Gene3D | Transferase(Phosphotransferase) domain 1 | 459 | 560 | - | - | |
Apr7g0979 | 590 | PANTHER | LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED | 13 | 590 | - | - | |
Apr7g0979 | 590 | ProSitePatterns | Tyrosine protein kinases specific active-site signature. | 427 | 439 | IPR008266 | GO:0004672|GO:0006468 | |
Apr7g0979 | 590 | SUPERFAMILY | Protein kinase-like (PK-like) | 307 | 557 | IPR011009 | - | |
Apr7g0979 | 590 | Gene3D | Phosphorylase Kinase; domain 1 | 313 | 379 | - | - | |
Apr7g0979 | 590 | Pfam | LysM domain | 109 | 155 | IPR018392 | - | |
Apr7g0979 | 590 | Pfam | LysM domain | 56 | 93 | IPR018392 | - | |
Apr7g0979 | 590 | ProSiteProfiles | Protein kinase domain profile. | 279 | 560 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Apr7g0979 | 590 | PANTHER | SERINE/THREONINE RECEPTOR-LIKE KINASE NFP | 13 | 590 | - | - | |
Apr7g0979 | 590 | Gene3D | Transferase(Phosphotransferase) domain 1 | 380 | 458 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Apr7g0979 | Apr-Chr7 | 16853971 | 16855743 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Apr7g0979 | 79 | 561 | Receptor kinase-like Gene Family | AT3G21630 | 31.784 | 5.43e-70 | 235 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-XI-1 | Apr7g0979 | PK_Tyr_Ser-Thr | 6.5e-24 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Apr7g0979 | - | - | gmx:102669100 | 981.474 |