Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0979 ATGGCCTCTCGTTCTCACAGTCTTTGTCTTGCACTCATGTTGTTTTTCACTAACATTGCAGCTCAATCACAACAAACCAATGGAACAAACTTTTCATGCCCAGCTGATTCACCTCCTTCCTGTGAAACCTATGTAACATACATTGCTCAGTCTCCTAATTTCTTGAGTCTGACCAACATATCTAATATATTTGATACCAGCCCTTTATCCATTGCAAGAGCTAGTAACTTAGAGCAAGAGGATGACAAGCTGATTCCTGACCAAGTCTTACTGATACCTGTAACTTGTGGTTGCACTGGAACCCTCTCTTATGCCAATATCTCCTATGAGATCAATCAAGGCGATAGCTACTCCTTTGTTGCAACCACTTTATACGAGAATCTCACCAATTGGCATGCAGTGATGGACTTAAACCCTGGTCTAAGTCCAAATATGTTGCCAGTAGGCGTCAAAGTAATAGTTCCTTTATTCTGCAGGTGCCCTTCAAAGAACCAGTTGGACAAAGGGATACAGTACCTGATTACCTACGTGTGGCAGCCCAATGACAATGTTTCCCTTGTAAGTGCCAAGTTTGGTGCATCACTACAAAACATATTGACCGAAAACAACTATGGTCAAAACTTCACTTCTGCAACCAACCTTCCAGTTTTGATCCCAGTGACACACTTGCCAGATCTTATTCAACCTCATTTGGATGTAAAAAAGGGAAGCATTCATCTTTCAGTTATACTTGGCATTAGCCTGGGATGCACAGTTTTAACTGTAGTTTTAATGGTATTACTGGTGTATGTGTATTGTTTGAAAATGAAGAGTTTGAACAGGAGTGCTTCATCAGCCGAGACTGCGGATAAGCTACTTTCTGGTGTTTCAGGCTATCTAAGGAAGCCAACTGTGTATGAAATTGATGTGATCATAGAAGCTACCATGAGCCTCAGTGAGCAGTGCAAGATTGGTGAATCAGTGTACAAGGCAAATATAAAAGATCAGGTTTTGGCAGTAAAAAAAATCAAGGAAGATGCCTCGGAGGAGCTGAAAATTCTGCAGAAGTTGAATCATGGAAATCTGGTGAAATTAATGGGTGTTTCATCAGACAATGATGGGAATTGCTTTGTGGTTTATGAATATGCTGAAAATGGGTCTCTTGATGACTGGCTATTCTCCAAGTCTTCTTCAGACACATCAAGCTCAATGGCTTCCCTTACTTGGTGTCAAAGGATAAGCATAGCTGTGGATGTTGCAATGGGTCTACAATACATGCATGAACATGCTTATCCAAGAATAGTCCACAGGGACATCACGAGTAGTAATATCCTTCTTGACTCAAACTTTAAGGCCAAGATAGCTAATTTTTCCATGGCCAGAACTTTTACTAACCCAATGATGCCAAAAATAGATGTCTTTGCTTTTGGGGTGGTGCTAATAGAGTTGCTTACAGGAAGGAAAGCCATAACAACCAAAGAAAATGGCGAGGTGGTTATGCTGTGGAAGGACATTTGGAAGATCTTTGATCAAGAAGAGAATAGAGAGGAGATGCTCAGAAAATGGATGGACCCTAAGTTAGAGAGCTTTTATCCTATAGATTATGCTCTCAGCTTGGCTTCCTTGGCAGTGAATTGCACTGCAGATAAGTCCTTGTCCAGACCAACAATTGCAGAAATTGTTCTTAGCCTCTCCCTTTTCACTCAGCCATCTCCTGCTACATTGGAGAGATCATTGACTTCTGGATTAGATGTAGAAGTTACTCAAATTGTCACTTCCATAGCTGCTCGTTGA 1773 0.4112 MASRSHSLCLALMLFFTNIAAQSQQTNGTNFSCPADSPPSCETYVTYIAQSPNFLSLTNISNIFDTSPLSIARASNLEQEDDKLIPDQVLLIPVTCGCTGTLSYANISYEINQGDSYSFVATTLYENLTNWHAVMDLNPGLSPNMLPVGVKVIVPLFCRCPSKNQLDKGIQYLITYVWQPNDNVSLVSAKFGASLQNILTENNYGQNFTSATNLPVLIPVTHLPDLIQPHLDVKKGSIHLSVILGISLGCTVLTVVLMVLLVYVYCLKMKSLNRSASSAETADKLLSGVSGYLRKPTVYEIDVIIEATMSLSEQCKIGESVYKANIKDQVLAVKKIKEDASEELKILQKLNHGNLVKLMGVSSDNDGNCFVVYEYAENGSLDDWLFSKSSSDTSSSMASLTWCQRISIAVDVAMGLQYMHEHAYPRIVHRDITSSNILLDSNFKAKIANFSMARTFTNPMMPKIDVFAFGVVLIELLTGRKAITTKENGEVVMLWKDIWKIFDQEENREEMLRKWMDPKLESFYPIDYALSLASLAVNCTADKSLSRPTIAEIVLSLSLFTQPSPATLERSLTSGLDVEVTQIVTSIAAR* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0979 590 Pfam Protein tyrosine and serine/threonine kinase 331 457 IPR001245 GO:0004672|GO:0006468
Apr7g0979 590 SMART LysM_2 46 93 IPR018392 -
Apr7g0979 590 SMART LysM_2 108 155 IPR018392 -
Apr7g0979 590 Gene3D Transferase(Phosphotransferase) domain 1 459 560 - -
Apr7g0979 590 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 13 590 - -
Apr7g0979 590 ProSitePatterns Tyrosine protein kinases specific active-site signature. 427 439 IPR008266 GO:0004672|GO:0006468
Apr7g0979 590 SUPERFAMILY Protein kinase-like (PK-like) 307 557 IPR011009 -
Apr7g0979 590 Gene3D Phosphorylase Kinase; domain 1 313 379 - -
Apr7g0979 590 Pfam LysM domain 109 155 IPR018392 -
Apr7g0979 590 Pfam LysM domain 56 93 IPR018392 -
Apr7g0979 590 ProSiteProfiles Protein kinase domain profile. 279 560 IPR000719 GO:0004672|GO:0005524|GO:0006468
Apr7g0979 590 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 13 590 - -
Apr7g0979 590 Gene3D Transferase(Phosphotransferase) domain 1 380 458 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0979 Apr-Chr7 16853971 16855743 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0979 79 561 Receptor kinase-like Gene Family AT3G21630 31.784 5.43e-70 235
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Apr7g0979 PK_Tyr_Ser-Thr 6.5e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0979 - - gmx:102669100 981.474
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0979 7 16853971 16855743 Apr7g0979 7 16853971 16855743 ECH