Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0969 ATGGGAATAGCAACACCGCCACTTTCGTCCATTCTCTCACACTCAAACAAACACGATTCTTCGAATTCTATGTCCCAAGATTATCAACAAGGAATCTTCAGCTTCTCGAATGGGTTCGAGAGATCATCGACGGTAGGTCCGCAGCAGCAGATCCGGAGGGAGAAAGCGAGGTTCGAGGCAGCAGCGCCGCCGCCATTGGTGGGGATAGAGGAAGAAGAACCGGGAGGGATTCCGGTGTACGAAAGCGCCGGGATGTTGTCGGAGATGTTTAATTTTCCTCCCGCCGGCGGCGAATTGTTGGAACAGCAGCAGCCGGTGACGGCGTCGTTTCGAGCGGCGAGGCAACCGGGAGAGTGGTACGGAAACCGGCAACTAGGGGTAATGAATATGATGAGTGGGTTGGGAGATTCGAAGAACCAAAACGGTGCGCATAGCCGAGAAGGTTTGGTTCAGAACCAGATTTCAAGCATTAATGCTGAGTCAGCAGCTGCCATGCAGCTTTTCCTGATGAACCCTCAAACGAGGTCACCTTCTCCTCCCCAGAATCACGCTCCTCCTTCCTCAACGCTTCACATGTTGCTTCCCAACCCTTCTTCTAATTCGCTTCAAGGGTTCACCGGTTCGGCACCGGGAGGGTCTTTTGGTCAATTCACTTGGGTTCCTGACAGTGCTCATCAAGAAGGAGGTGTTGTGGAAGGGCAAGGTCTTTCGTTGTCGTTGTCTTCTTCGTTGGAAGCGGCGAAAGCGGAGGAATTGAGGATGGGGGATAGTGGTTTTCTGTATTATAATCATCAACAAGGTCCCTCTTCTTCTTCTTCCGCGGCTCAGTTTCAGTACAAGAATAATAACCACCATTTGCAAGGGGCAATAGCACACAACAACCACCACCAGGGACACGTTGGGTTCGGCTCATCGTCGTTAGGTGTAGTCAATGTTCTCAGAAATTCCAAGTATGTGAAGGCTGCACAAGAGTTGCTCGAAGAGTTTTGCAGTGTTGGGAGGGGTCAGTTTAAGAAGAACAAGTTCAATAGGCAAAATTCAAACCCTAATTCAAATCCTGGGGGCGGTGCTGCTTCTTCGTCTTCATCAAAAGATGCTCCTCCTCCTCCTCCTTTGTCAGCAGCTGATAGGATTGAGCATCAGAGAAGGAAGGTCAAACTTCTATCAATGCTTGACGAGGTGGACAGGAGATACAACCACTACTGCGAACAAATGCAAATGGTAGTGAACTCATTTGACCTGATGATGGGGTTTGGTGCGGCTGTTCCATACACGGCACTGGCGCAAAAAGCAATGTCTAGGCATTTCCGGTGTCTGAAGGATGCAATAACAGCGCAGCTGAAGCACAGTTGTGAGCTACTAGGAGAGAAAGATGGTGCAGGAACCTCAGGTTTGACCAAGGGAGAGACCCCAAGGCTTAAGATGCTTGAACAAAGCCTAAGACAGCAGAGAGCCTTCCACCAGATGGGTATGATGGAACAAGAAGCTTGGAGACCACAGAGAGGCTTGCCTGAACGATCTGTCAACATTTTAAGAGCCTGGCTTTTCGAGCATTTTCTCCACCCGTATCCAAGCGATGCAGATAAGCATCTGTTGGCACGACAGACCGGGCTATCGCGAAATCAGGTATCAAACTGGTTCATTAATGCCAGGGTTCGGTTGTGGAAACCCATGGTGGAAGAGATGTACCAACAAGAACTTAAAGAAGCAGAGAGTGCAGAAGAGAGAGAAAAGAACGAGAGCAACAGCAATAGTGGCCACCTAGCACAAACTCCAACCGCAGCAGCAGCAGCTACAACATCAACAGCAACAGCGCCACCACCACCAACAACAACGACAACAACAACAAAACCAACAGGCAAAAGATCCGATATCAATGCCACTGAAAGCGACCCTTCACTTGTCGCAATCAATAGGCAAGGTTTCTCGGAAAACAAAGCAAAACAGTCCACCACCTCCACCACTACAACCACCACCATCAACGCCACCGCCTCTGAGGTGGCGCCACCCGTGTCTCAGTGCTTCGACTCAGACCTGCCACCACACAGATCAATTGCCAGTGATGACACGTGTCGCTTGGTTACAGCAGATTATGGGACCGCCTCTGCAAGTGCTGACATTGGATCCACTCTCATTAGATTTGGGACCACCCCCGGTGACGTGTCACTCACCCTAGGGCTACGCCACGCCGGGAACATGCCCGAGAAAACCCCTTTCTCTGTTAGAGACTTTGGAGCCATTTAA 2244 0.5036 MGIATPPLSSILSHSNKHDSSNSMSQDYQQGIFSFSNGFERSSTVGPQQQIRREKARFEAAAPPPLVGIEEEEPGGIPVYESAGMLSEMFNFPPAGGELLEQQQPVTASFRAARQPGEWYGNRQLGVMNMMSGLGDSKNQNGAHSREGLVQNQISSINAESAAAMQLFLMNPQTRSPSPPQNHAPPSSTLHMLLPNPSSNSLQGFTGSAPGGSFGQFTWVPDSAHQEGGVVEGQGLSLSLSSSLEAAKAEELRMGDSGFLYYNHQQGPSSSSSAAQFQYKNNNHHLQGAIAHNNHHQGHVGFGSSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKKNKFNRQNSNPNSNPGGGAASSSSSKDAPPPPPLSAADRIEHQRRKVKLLSMLDEVDRRYNHYCEQMQMVVNSFDLMMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGAGTSGLTKGETPRLKMLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEEMYQQELKEAESAEEREKNESNSNSGHLAQTPTAAAAATTSTATAPPPPTTTTTTTKPTGKRSDINATESDPSLVAINRQGFSENKAKQSTTSTTTTTTINATASEVAPPVSQCFDSDLPPHRSIASDDTCRLVTADYGTASASADIGSTLIRFGTTPGDVSLTLGLRHAGNMPEKTPFSVRDFGAI* 748
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0969 747 Pfam Associated with HOX 312 444 IPR006563 -
Apr7g0969 747 SMART prehox3 307 445 IPR006563 -
Apr7g0969 747 MobiDBLite consensus disorder prediction 583 665 - -
Apr7g0969 747 CDD homeodomain 497 558 IPR001356 GO:0003677
Apr7g0969 747 SMART HOX_1 497 561 IPR001356 GO:0003677
Apr7g0969 747 MobiDBLite consensus disorder prediction 339 363 - -
Apr7g0969 747 MobiDBLite consensus disorder prediction 567 582 - -
Apr7g0969 747 Gene3D - 500 562 - -
Apr7g0969 747 MobiDBLite consensus disorder prediction 1 26 - -
Apr7g0969 747 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 2 64 736 - -
Apr7g0969 747 MobiDBLite consensus disorder prediction 172 192 - -
Apr7g0969 747 MobiDBLite consensus disorder prediction 8 26 - -
Apr7g0969 747 MobiDBLite consensus disorder prediction 567 665 - -
Apr7g0969 747 Coils Coil 560 583 - -
Apr7g0969 747 ProSiteProfiles 'Homeobox' domain profile. 494 557 IPR001356 GO:0003677
Apr7g0969 747 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 64 736 - -
Apr7g0969 747 MobiDBLite consensus disorder prediction 339 379 - -
Apr7g0969 747 Pfam Homeobox KN domain 514 553 IPR008422 GO:0003677|GO:0006355
Apr7g0969 747 SUPERFAMILY Homeodomain-like 499 564 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0969 Apr-Chr7 16701003 16708720 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0969 1 544 Homeobox Transcription Factor Family AT4G36870 54.243 9.90e-159 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Apr7g0969 POX 1.3e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0969 - - gmx:100786231 999.964
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0969 7 16701003 16708720 Apr7g0969 7 16701003 16708720 ECH
Apr3g0237 3 4302282 4310263 Apr7g0969 7 16701003 16708720 ECH
Apr7g0969 7 16701003 16708720 Apr3g0237 3 4302282 4310263 PCT