Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Apr7g0966 ATGGAAGTGCTTCCTTGTTCTGGTGTTAAATATGCCGGGGAATCTGATTGTCCTCAGCAGAATTCAGGATCAGCTTTTGTATACCGGGAAGAACATAATTGCCCTGAAAATGATGAACAAGTCAGATTGGTAGATGCTCAACCGAGTGTATCATCACATGAGATGCAAGGTCTTCAGATAGAAGGGCAAGACGAAGGAAAACAGATTATTTGTGATTTGTCGACTAATTCTGATTGCCAATGCATTGGAGCTTCATTTTATGACTGTCAAGTGGAAGACCAAAAGGAATATTGTGGTTTCCATGATTTTCAAGAAGATGTGATAAATGAACCTTGCTTAATGTCTGAAAATTCTGTCTCTATTGTGGACACAATTGAAAGTGAATCACCAAACAACAATAGGGAAGGAGACTTGTCATGTTCTGAACCCAAGTGGCTGGAGGGGGATGGATCTGTGGCATTGTGGGTCAAGTGGAGAGGGAAGTGGCAGGCTGGTATCCGATGTGCAAGGGCTGACTGGCCCTTATGGACTTTGAAAGCAAAACCAACTCATGACCGAAAGAAATATTTTGTCATATTTTTTCCGCACACAAGGATTTATTCTTGGGCAGACATGCTGCTTGTTAGACCAATTAATGAGTTTCCCCACCCTATTGTGTATAATTCTCATCAGGTAGGACTGAAAATGGTAAGAGACTTAACTGTTGCGCGGCGATTTATAATGCAAAAGCTAGCTATTGGCATGCTGAACATCGTCGATCAGTTACATTTTAATGCTTTGACAGAAACTGCCCGTGATGTGAAAGTCTGGAAGGAATTTGCTATGGAGGCTTCTCGTTGTAATGGTTATTCTGATTTTGGGAGAATGCTTCTAAAGCTGCATAATAGCATACTGCAGCCATATATAAATGCTGACTGGTTACAACATTCTTATCACTCTTGGGATGAAAGATGTCAGAGTGCAAATAGTGCTGAATTGGTAGAGCTGCTGAAGGAGGAATTGTTTGATTCTATTTCATGGAATGATGTCAATACTCTCTGGGATGCACCAGTGCAACCACTATTAGGTTCTGAATGGAAAACCTTGAAGCATGATGTGATGAAATGGTTTTCAACACCACATTCCTTAACGAGCAGCAAAGACACCCAGCAACAGAGCTCTGATGATTTGTACCAAGCAAACCTTCAGGTTTGTAGAAAAAGGCCCAAACTTGAAGTTCGTCGTGCAGAGACACATGCTTCACAGGTAGAAATCAAGGGTTCAGATCACTCTATTGCTCTTGACACTGATCCTGGCTTCTTTAAGAATCAGGACACATTGAGCGCATTAGCAACTGAGACTTACAAACAGGACCATGTCAGGGAGGTACCTATAGCAACTGATTCACCTAGTAATTTGGCCAGTAAATGGAACGAAATTGTAGTTGAGGCTGCTGATTCTGATTTCTTGCATAACAAAGAAATAGGATCAACACCTGTAAGTGAAATTACTGTTGTAAAATCTGTAGAACCTGGTAGTAAGAATCGACAATGTATAGCTTATATTGAAGCGAAGGGAAGACAGTGTGTGAGATGGGCAAATGATGGTGATGTATACTGTTGTGTGCATTTATCATCTCGATTCTTGGGCAGCTCAACAAAAGCTGAAAAGCCTGCTGTGGTTGATACTCCTATGTGTGAAGGTACAACTGTTCTGGGTACTAGATGTAAGCATCGTTCCCTACCTGGCTCTTTATTCTGTAAGAAACACCGGCCACATGGTGAAACCGAACAGATTTCAAATTTACCCCAAAATACACTAAAGAGGAAACATGAAGAAAATTATACTGGTCCAGAGGACATGTTCTGCAAAGACATGGTTTTGGTAAATGTTGAAAGCCCACTGCAAGTGGATCCAGTGTCATCCATTGGTGGTGATTTGTTACATGGAGAAAGCAACTTTAATGAGAAGCCCATGCCTTCCGAAAATGATCATAATGCAATGGAGTCACTGCAATGTATAGGTTCTCCTCCCTATGATAACAAAAATCCTTGTAGAGAAGGTCCTAAAAGGTATTTCTTGTATTGTGAACAACACCTTCCAAGCTGGCTTAAACGTGCAAGAAATGGGAAGAGTAGAATAGTATCAAAAGAAGTGTTCACAGAACTTTTGAGGGACTGCAGCTCATGGGAGCAAAAGGTACATCTGCATAAAGCATGTGAGCTTTTTTACAGGCTATTCAAGAGCATTTTGTCGTTACGAAACCCTGTTCCTAAGGATGTCCAATTCCAGTGGGCTTTAACTGAAGCCTCTAAAGATTCTTGTGTAGGAGAATTTTTTACTAAGTTAGTTCATAGTGAAAAGGAGAGAATCAAATTGATGTGGGGATTCAATGATGACATGGATATGCCGTCTGTTATGCAAGAACCACCTCTCTTGCCATTTGCAACTAATGATAGTTTTGATAATGAAAATGCCATCAAGTGTAAGATATGCTCTGCTGATTTTCCTGATGACCAAGCACTTGGTAACCACTGGATGGACAGTCATAAAAAGGAAGCACAGTGGCTGTTTAGAGGCTATGCATGTGCTATTTGTCTGGATTCTTTTACTAACAAGAAAATGTTGGAAAATCATGTTCAGGAGAGACACCACGTGCAATTTGTTGAACAATGCATGCTTCTCCAATGTATTCCTTGTGGGAGTCATTTTGGAAATACTGAGCAACTGTGGCAGCATGTTTTATCAGTTCATCCTGTTGATTTTAAACCAGCAAAAGCTCCTGAGCAGCAAACTTTCTCTAATGGAGAAGATTCTCCAGTAAAACATGATCAAGGAAATTTAGCCTCTTTGGAGAATAATTCTGAGAATACAGGTGGTTTACGAAAATTTGTTTGCAGGTTTTGTGGATTAAAGTTTGATTTACTACCTGACCTAGGTCGACATCACCAAGCTGCTCATATGGGGCCCAATCTAGTTAGCAGCCGCCCTGGAAAGAGGGGAGTTCGCCATTATTCATATAGACTGAAATCTGGCAGACTTAGCCGCCCTAGATTTAAAAAAGGTTTGGCAGCAGCATCATACAGGATTAGAAATAAGGCTAATGCTAATTTAAAGCGATGTATTCAGGCAACAAACTCACTTGGCATGGGAGGAATAACTATAAAACCTCATGCAAATGAAACAACCAACATTGGTAGATTGGCAGAACATCAATGCTCAGCTGTTGCAAAGATTTTGTTTTCAGAGATTCAGAAGACTAAACCACGGCCTAACAATCTTGATATTTTAACAATTGCCCGCTCTACTTGCTGCAAAGTTAGTCTTGTAGCCTCACTGGAGGAGAAATATGGAATTCTACCTGAAAAACTCTATTTGAAGGCAGCAAAACTTTGCAGTGAACATAATATTTTAGTGAATTGGCACCAAGAAGGGTTTGTTTGTCCTAGAGGATGTTATGTATCAAAGGATCAAGCATTGCTCTCTACTTTAGCATCTCTTCCTAATGGTTTTGTAATGCCAAAATCTTCAAATTTATGTGATTCTGCAAGTGATGAGTGGGAGGTGGATGAATTTCACTGCATCATCAATTCACGTGGTTTAAAATTAGGTTCACTGCAAAAAGCTGTAATCTTGTGTGATGATATTAGCTTTGGGAAGGAATCAGTTCCAGTGATTTGTGTAGTAGATCAAGAACTTATGCATTCTCTTCATATGCCTGGATGTAATGAGCAGAATACAAACTCTTCTATGCCTTGGGAGAGTTTTACCTATGTTACCAAGCCAATACTCGACCAATCCCTTAGTCTTGATTCAGAGTGTCTGCAATTGGGATGTGCCTGCTCATATCCTACCTGCTGTCCTGAAACTTGTGATCATGTATACCTTTTTGGTAATGACTATGATGATGCAAAAGATATATTTGGGAAACCAATGCGTGGCAGGTTCCCATATGATGAGAATGGTCGAATAATCTTGGAGGAAGGTTATCTTGTCTCTGAGTGTAATCATATGTGCAAATGCAATAAAGCCTGTCCAAACAGAGTATTGCAGAATGGAGTACGAGTCAAATTGGAAGTTTTTAAAACAGAGAAAAAGGGATGGGCAGTAAGGGCTGGTGAAGCTATTCTACGAGGCACCTTTGTGTGTGAATACATTGGAGAAGTTTTAGATGTGCAGGAGGCATGCAACAGGCGCAAGAGATATGCTATAGGGAATTGCAGTTATTTCTATGATATCGATGCTCGTGTTAATGATATGGGTAGATTGATTGAAGGGCAGGCCCAATATGTAATTGATGCTTCTAAATATGGAAATGTCTCAAGGTTCATCAATCATAGCTGCTCGCCCAATCTTGTCAATCACCAAGTTCTTGTAGAGAGCATGGATTGTGAGCGTGCACATATTGGCTTTTATGCAAGTCGAGATATTGCTTTGGGTGAAGAGCTGACATATGACTATCAGTATGAGCTTGTTCCCGGAGAAGGATCTCCTTGTCTTTGTGAATCGTTGAAGTGTAGGGGACGCCTTTGTTAG 4515 0.4051 MEVLPCSGVKYAGESDCPQQNSGSAFVYREEHNCPENDEQVRLVDAQPSVSSHEMQGLQIEGQDEGKQIICDLSTNSDCQCIGASFYDCQVEDQKEYCGFHDFQEDVINEPCLMSENSVSIVDTIESESPNNNREGDLSCSEPKWLEGDGSVALWVKWRGKWQAGIRCARADWPLWTLKAKPTHDRKKYFVIFFPHTRIYSWADMLLVRPINEFPHPIVYNSHQVGLKMVRDLTVARRFIMQKLAIGMLNIVDQLHFNALTETARDVKVWKEFAMEASRCNGYSDFGRMLLKLHNSILQPYINADWLQHSYHSWDERCQSANSAELVELLKEELFDSISWNDVNTLWDAPVQPLLGSEWKTLKHDVMKWFSTPHSLTSSKDTQQQSSDDLYQANLQVCRKRPKLEVRRAETHASQVEIKGSDHSIALDTDPGFFKNQDTLSALATETYKQDHVREVPIATDSPSNLASKWNEIVVEAADSDFLHNKEIGSTPVSEITVVKSVEPGSKNRQCIAYIEAKGRQCVRWANDGDVYCCVHLSSRFLGSSTKAEKPAVVDTPMCEGTTVLGTRCKHRSLPGSLFCKKHRPHGETEQISNLPQNTLKRKHEENYTGPEDMFCKDMVLVNVESPLQVDPVSSIGGDLLHGESNFNEKPMPSENDHNAMESLQCIGSPPYDNKNPCREGPKRYFLYCEQHLPSWLKRARNGKSRIVSKEVFTELLRDCSSWEQKVHLHKACELFYRLFKSILSLRNPVPKDVQFQWALTEASKDSCVGEFFTKLVHSEKERIKLMWGFNDDMDMPSVMQEPPLLPFATNDSFDNENAIKCKICSADFPDDQALGNHWMDSHKKEAQWLFRGYACAICLDSFTNKKMLENHVQERHHVQFVEQCMLLQCIPCGSHFGNTEQLWQHVLSVHPVDFKPAKAPEQQTFSNGEDSPVKHDQGNLASLENNSENTGGLRKFVCRFCGLKFDLLPDLGRHHQAAHMGPNLVSSRPGKRGVRHYSYRLKSGRLSRPRFKKGLAAASYRIRNKANANLKRCIQATNSLGMGGITIKPHANETTNIGRLAEHQCSAVAKILFSEIQKTKPRPNNLDILTIARSTCCKVSLVASLEEKYGILPEKLYLKAAKLCSEHNILVNWHQEGFVCPRGCYVSKDQALLSTLASLPNGFVMPKSSNLCDSASDEWEVDEFHCIINSRGLKLGSLQKAVILCDDISFGKESVPVICVVDQELMHSLHMPGCNEQNTNSSMPWESFTYVTKPILDQSLSLDSECLQLGCACSYPTCCPETCDHVYLFGNDYDDAKDIFGKPMRGRFPYDENGRIILEEGYLVSECNHMCKCNKACPNRVLQNGVRVKLEVFKTEKKGWAVRAGEAILRGTFVCEYIGEVLDVQEACNRRKRYAIGNCSYFYDIDARVNDMGRLIEGQAQYVIDASKYGNVSRFINHSCSPNLVNHQVLVESMDCERAHIGFYASRDIALGEELTYDYQYELVPGEGSPCLCESLKCRGRLC* 1505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Apr7g0966 1504 Pfam Zinc finger C2H2-type, 3 repeats 856 981 IPR040689 -
Apr7g0966 1504 Pfam SET domain 1360 1480 IPR001214 GO:0005515
Apr7g0966 1504 Pfam Pre-SET motif 1210 1341 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr7g0966 1504 SUPERFAMILY SET domain 1199 1494 IPR046341 -
Apr7g0966 1504 ProSiteProfiles SET domain profile. 1349 1481 IPR001214 GO:0005515
Apr7g0966 1504 ProSiteProfiles Zinc finger C2H2 type domain profile. 957 985 IPR013087 -
Apr7g0966 1504 SMART set_7 1349 1487 IPR001214 GO:0005515
Apr7g0966 1504 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1504 - -
Apr7g0966 1504 Gene3D Classic Zinc Finger 814 885 - -
Apr7g0966 1504 Gene3D SET domain 1190 1485 IPR046341 -
Apr7g0966 1504 ProSiteProfiles Pre-SET domain profile. 1270 1346 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr7g0966 1504 MobiDBLite consensus disorder prediction 922 947 - -
Apr7g0966 1504 ProSitePatterns Zinc finger C2H2 type domain signature. 959 980 IPR013087 -
Apr7g0966 1504 ProSiteProfiles Zinc finger C2H2 type domain profile. 854 877 IPR013087 -
Apr7g0966 1504 SMART preset_2 1206 1333 IPR007728 GO:0005634|GO:0008270|GO:0018024|GO:0034968
Apr7g0966 1504 ProSitePatterns Zinc finger C2H2 type domain signature. 890 911 IPR013087 -
Apr7g0966 1504 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 1 1504 - -
Apr7g0966 1504 ProSitePatterns Zinc finger C2H2 type domain signature. 822 843 IPR013087 -
Apr7g0966 1504 SMART c2h2final6 854 877 IPR013087 -
Apr7g0966 1504 SMART c2h2final6 820 843 IPR013087 -
Apr7g0966 1504 SMART c2h2final6 957 980 IPR013087 -
Apr7g0966 1504 SMART c2h2final6 888 911 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Apr7g0966 Apr-Chr7 16654338 16667793 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Apr7g0966 120 1503 C2H2 Transcription Factor Family AT2G23740 51.926 0.0 1394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Apr7g0966 Pre-SET 4.9e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Apr7g0966 - - gmx:100786757 2644
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Apr7g0966 7 16654338 16667793 Apr7g0966 7 16654338 16667793 ECH